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Genome sequencing

Transcriptome sequencing and screening of genes related to the MADS-box gene family in Clematis courtoisii

Mingjian Chen, Linfang Li, [ ... ], Ya Li

Kuura—An automated workflow for analyzing WES and WGS data

Dhanaprakash Jambulingam, Venkat Subramaniam Rathinakannan, [ ... ], Vidal Fey

SVvalidation: A long-read-based validation method for genomic structural variation

Yan Zheng, Xuequn Shang

Reduced representation approaches produce similar results to whole genome sequencing for some common phylogeographic analyses

Drew J. Duckett, Kailee Calder, [ ... ], Bryan C. Carstens

Rapid and collective determination of the complete “hot-spring frog” mitochondrial genome containing long repeat regions using Nanopore sequencing

Yuka Asaeda, Kento Shiraga, [ ... ], Takeshi Igawa

Complete genome assembly of Hawai’i environmental nontuberculous mycobacteria reveals unexpected co-isolation with methylobacteria

Jo Hendrix, L. Elaine Epperson, [ ... ], Michael Strong

From chip to SNP: Rapid development and evaluation of a targeted capture genotyping-by-sequencing approach to support research and management of a plaguing rodent

Kevin P. Oh, Nikki Van de Weyer, [ ... ], Peter R. Brown

Evaluation of an optimized germline exomes pipeline using BWA-MEM2 and Dragen-GATK tools

Nofe Alganmi, Heba Abusamra

Antigen concentration, viral load, and test performance for SARS-CoV-2 in multiple specimen types

Allison Golden, Michelle Oliveira-Silva, [ ... ], Gonzalo J. Domingo

Rapid genotyping of porcine reproductive and respiratory syndrome virus (PRRSV) using MinION nanopore sequencing

Leonardo Cardia Caserta, Jianqiang Zhang, Pablo Piñeyro, Diego G. Diel

Chromosome-scale genome sequence assemblies of the ‘Autumn Bliss’ and ‘Malling Jewel’ cultivars of the highly heterozygous red raspberry (Rubus idaeus L.) derived from long-read Oxford Nanopore sequence data

R. Jordan Price, Jahn Davik, [ ... ], Daniel James Sargent

Evaluation of miniaturized Illumina DNA preparation protocols for SARS-CoV-2 whole genome sequencing

Sureshnee Pillay, James Emmanuel San, [ ... ], Jennifer Giandhari

A comprehensive performance analysis of sequence-based within-sample testing NIPT methods

Tom Mokveld, Zaid Al-Ars, Erik A. Sistermans, Marcel Reinders

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