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Genome sequencing

Deciphering mixed infections by plant RNA virus and reconstructing complete genomes simultaneously present within-host

Martine Bangratz, Aurore Comte, [ ... ], Charlotte Tollenaere

Clonal phylogenies inferred from bulk, single cell, and spatial transcriptomic analysis of epithelial cancers

Andrew Erickson, Sandy Figiel, [ ... ], Alastair D. Lamb

Whole genome sequences of nine Taylorella equigenitalis strains isolated in the Czech Republic between 1982–2021: Molecular dating suggests a common ancestor at the time of Roman Empire

Matěj Hrala, Petr Andrla, [ ... ], David Šmajs

MetaCONNET: A metagenomic polishing tool for long-read assemblies

Bingru Sun, Jian Guo, [ ... ], Hui Tian

Comparative analysis of whole exome sequencing kits for the canine genome

Jinhee Jang, Yong-Jik Lee, [ ... ], Tae Woo Jung

Avidity sequencing of whole genomes from retinal degeneration pedigrees identifies causal variants

Pooja Biswas, Adda Villanueva, [ ... ], Radha Ayyagari

Validated DNA isolation method ensuring successful long-read sequencing of cattle semen genome

Erwan Denis, Cécile Grohs, Cécile Donnadieu, Carole Iampietro

Variant calling and genotyping accuracy of ddRAD-seq: Comparison with 20X WGS in layers

Mathilde Doublet, Fabien Degalez, [ ... ], Frédéric Lecerf

Method for isolation of high molecular weight genomic DNA from Botryococcus biomass

Ivette Cornejo-Corona, Devon J. Boland, Timothy P. Devarenne

Avirulence of a spontaneous Francisella tularensis subsp. mediasiatica prmA mutant

Vitalii Timofeev, Irina Bakhteeva, [ ... ], Gilles Vergnaud

Exploring the potential of Oxford Nanopore Technologies sequencing for Mycobacterium tuberculosis sequencing: An assessment of R10 flowcells and V14 chemistry

Anzaan Dippenaar, Emilyn Costa Conceição, [ ... ], Annelies Van Rie

Efficient wastewater sample filtration improves the detection of SARS-CoV-2 variants: An extensive analysis based on sequencing parameters

Angelo Robotto, Carlotta Olivero, [ ... ], Denis Polato

SARS-CoV-2 variant introduction following spring break travel and transmission mitigation strategies

Justin M. Napolitano, Sujata Srikanth, [ ... ], Delphine Dean

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