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Genome annotation

Genomic Sequence around Butterfly Wing Development Genes: Annotation and Comparative Analysis

Inês C. Conceição, Anthony D. Long, Jonathan D. Gruber, Patrícia Beldade

Annotation of Two Large Contiguous Regions from the Haemonchus contortus Genome Using RNA-seq and Comparative Analysis with Caenorhabditis elegans

Roz Laing, Martin Hunt, [ ... ], John S. Gilleard

Whole Transcriptome Profiling of Successful Immune Response to Vibrio Infections in the Oyster Crassostrea gigas by Digital Gene Expression Analysis

Julien de Lorgeril, Reda Zenagui, [ ... ], Evelyne Bachère

SEAS: A System for SEED-Based Pathway Enrichment Analysis

Xizeng Mao, Yu Zhang, Ying Xu

Gene Coexpression Network Analysis as a Source of Functional Annotation for Rice Genes

Kevin L. Childs, Rebecca M. Davidson, C. Robin Buell

HelmCoP: An Online Resource for Helminth Functional Genomics and Drug and Vaccine Targets Prioritization

Sahar Abubucker, John Martin, Christina M. Taylor, Makedonka Mitreva

GenExp: An Interactive Web-Based Genomic DAS Client with Client-Side Data Rendering

Bernat Gel Moreno, Xavier Messeguer Peypoch

Enzymes Are Enriched in Bacterial Essential Genes

Feng Gao, Randy Ren Zhang

Genome Assembly Has a Major Impact on Gene Content: A Comparison of Annotation in Two Bos Taurus Assemblies

Liliana Florea, Alexander Souvorov, Theodore S. Kalbfleisch, Steven L. Salzberg

A Compendium of Canine Normal Tissue Gene Expression

Joseph Briggs, Melissa Paoloni, [ ... ], Chand Khanna

Combining Computational Prediction of Cis-Regulatory Elements with a New Enhancer Assay to Efficiently Label Neuronal Structures in the Medaka Fish

Emmanuel Mongin, Thomas O. Auer, [ ... ], Laurence Ettwiller

Evaluating the Fidelity of De Novo Short Read Metagenomic Assembly Using Simulated Data

Miguel Pignatelli, Andrés Moya

Domestication of Transposable Elements into MicroRNA Genes in Plants

Yang Li, Chaoqun Li, Jie Xia, Youxin Jin

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