Purging due to self-fertilization does not prevent accumulation of expansion load

Leo Zeitler, Christian Parisod, Kimberly J. Gilbert

PLOS Genetics: published September 1, 2023 | https://doi.org/10.1371/journal.pgen.1010883

Antagonistic regulation of salt and sugar chemotaxis plasticity by a single chemosensory neuron in Caenorhabditis elegans

Masahiro Tomioka, Yusuke Umemura, Yutaro Ueoka, Risshun Chin, Keita Katae, Chihiro Uchiyama, Yasuaki Ike, Yuichi Iino

PLOS Genetics: published September 5, 2023 | https://doi.org/10.1371/journal.pgen.1010637

On the interpretation of transcriptome-wide association studies

Christiaan de Leeuw, Josefin Werme, Jeanne E. Savage, Wouter J. Peyrot, Danielle Posthuma

PLOS Genetics: published September 7, 2023 | https://doi.org/10.1371/journal.pgen.1010921

Modeling of African population history using f-statistics is biased when applying all previously proposed SNP ascertainment schemes

Pavel Flegontov, Ulaş Işıldak, Robert Maier, Eren Yüncü, Piya Changmai, David Reich

PLOS Genetics: published September 7, 2023 | https://doi.org/10.1371/journal.pgen.1010931

Evolutionary conserved circular MEF2A RNAs regulate myogenic differentiation and skeletal muscle development

Xiaoxu Shen, Xiyu Zhao, Haorong He, Jing Zhao, Yuanhang Wei, Yuqi Chen, Shunshun Han, Yifeng Zhu, Yao Zhang, Qing Zhu, Huadong Yin

PLOS Genetics: published September 7, 2023 | https://doi.org/10.1371/journal.pgen.1010923

Steroid receptor coactivator TAIMAN is a new modulator of insect circadian clock

Vlastimil Smykal, Lenka Chodakova, Marketa Hejnikova, Kristina Briedikova, Bulah Chia-Hsiang Wu, Hana Vaneckova, Ping Chen, Anna Janovska, Pavlina Kyjakova, Martin Vacha, David Dolezel

PLOS Genetics: published September 8, 2023 | https://doi.org/10.1371/journal.pgen.1010924

Allele surfing causes maladaptation in a Pacific salmon of conservation concern

Quentin Rougemont, Thibault Leroy, Eric B. Rondeau, Ben Koop, Louis Bernatchez

PLOS Genetics: published September 8, 2023 | https://doi.org/10.1371/journal.pgen.1010918

Fever-like temperature bursts promote competence development via an HtrA-dependent pathway in Streptococcus pneumoniae

Mickaël Maziero, David Lane, Patrice Polard, Mathieu Bergé

PLOS Genetics: published September 12, 2023 | https://doi.org/10.1371/journal.pgen.1010946

Histone methylation regulates reproductive diapause in Drosophila melanogaster

Abigail DiVito Evans, Regina A. Fairbanks, Paul Schmidt, Mia T. Levine

PLOS Genetics: published September 13, 2023 | https://doi.org/10.1371/journal.pgen.1010906

A detoxification pathway initiated by a nuclear receptor TcHR96h in Tetranychus cinnabarinus (Boisduval)

Xiang Wen, Kaiyang Feng, Juan Qin, Peng Wei, Peng Cao, Youjun Zhang, Zhiguang Yuchi, Lin He

PLOS Genetics: published September 14, 2023 | https://doi.org/10.1371/journal.pgen.1010911

Non-O ABO blood group genotypes differ in their associations with Plasmodium falciparum rosetting and severe malaria

D. Herbert Opi, Carolyne M. Ndila, Sophie Uyoga, Alex W. Macharia, Clare Fennell, Lucy B. Ochola, Gideon Nyutu, Bethseba R. Siddondo, John Ojal, Mohammed Shebe, Kennedy O. Awuondo, Neema Mturi, Norbert Peshu, Benjamin Tsofa, Gavin Band, Kathryn Maitland, Dominic P. Kwiatkowski, Kirk A. Rockett, Thomas N. Williams, J. Alexandra Rowe

PLOS Genetics: published September 14, 2023 | https://doi.org/10.1371/journal.pgen.1010910

Saturation genome editing of 11 codons and exon 13 of BRCA2 coupled with chemotherapeutic drug response accurately determines pathogenicity of variants

Sounak Sahu, Teresa L. Sullivan, Alexander Y. Mitrophanov, Mélissa Galloux, Darryl Nousome, Eileen Southon, Dylan Caylor, Arun Prakash Mishra, Christine N. Evans, Michelle E. Clapp, Sandra Burkett, Tyler Malys, Raj Chari, Kajal Biswas, Shyam K. Sharan

PLOS Genetics: published September 15, 2023 | https://doi.org/10.1371/journal.pgen.1010940

Rescue of bmp15 deficiency in zebrafish by mutation of inha reveals mechanisms of BMP15 regulation of folliculogenesis

Yue Zhai, Xin Zhang, Cheng Zhao, Ruijing Geng, Kun Wu, Mingzhe Yuan, Nana Ai, Wei Ge

PLOS Genetics: published September 15, 2023 | https://doi.org/10.1371/journal.pgen.1010954

Review and further developments in statistical corrections for Winner’s Curse in genetic association studies

Amanda Forde, Gibran Hemani, John Ferguson

PLOS Genetics: published September 18, 2023 | https://doi.org/10.1371/journal.pgen.1010546

Neuronal mTORC1 inhibition promotes longevity without suppressing anabolic growth and reproduction in C. elegans

Hannah J. Smith, Anne Lanjuin, Arpit Sharma, Aditi Prabhakar, Ewelina Nowak, Peter G. Stine, Rohan Sehgal, Klement Stojanovski, Benjamin D. Towbin, William B. Mair

PLOS Genetics: published September 18, 2023 | https://doi.org/10.1371/journal.pgen.1010938

Genome-wide circadian gating of a cold temperature response in bread wheat

Calum A. Graham, Pirita Paajanen, Keith J. Edwards, Antony N. Dodd

PLOS Genetics: published September 18, 2023 | https://doi.org/10.1371/journal.pgen.1010947

The proprotein convertase BLI-4 promotes collagen secretion prior to assembly of the Caenorhabditis elegans cuticle

Susanna K. Birnbaum, Jennifer D. Cohen, Alexandra Belfi, John I. Murray, Jennifer R. G. Adams, Andrew D. Chisholm, Meera V. Sundaram

PLOS Genetics: published September 18, 2023 | https://doi.org/10.1371/journal.pgen.1010944

eQTL Catalogue 2023: New datasets, X chromosome QTLs, and improved detection and visualisation of transcript-level QTLs

Nurlan Kerimov, Ralf Tambets, James D. Hayhurst, Ida Rahu, Peep Kolberg, Uku Raudvere, Ivan Kuzmin, Anshika Chowdhary, Andreas Vija, Hans J. Teras, Masahiro Kanai, Jacob Ulirsch, Mina Ryten, John Hardy, Sebastian Guelfi, Daniah Trabzuni, Sarah Kim-Hellmuth, William Rayner, Hilary Finucane, Hedi Peterson, Abayomi Mosaku, Helen Parkinson, Kaur Alasoo

PLOS Genetics: published September 18, 2023 | https://doi.org/10.1371/journal.pgen.1010932

MBL-1 and EEL-1 affect the splicing and protein levels of MEC-3 to control dendrite complexity

Jianxin Xie, Wei Zou, Madina Tugizova, Kang Shen, Xiangming Wang

PLOS Genetics: published September 20, 2023 | https://doi.org/10.1371/journal.pgen.1010941

Structural transitions upon guide RNA binding and their importance in Cas12g-mediated RNA cleavage

Mengxi Liu, Zekai Li, Jing Chen, Jinying Lin, Qiuhua Lu, Yangmiao Ye, Hongmin Zhang, Bo Zhang, Songying Ouyang

PLOS Genetics: published September 20, 2023 | https://doi.org/10.1371/journal.pgen.1010930

BMP suppresses WNT to integrate patterning of orthogonal body axes in adult planarians

Eleanor G. Clark, Christian P. Petersen

PLOS Genetics: published September 20, 2023 | https://doi.org/10.1371/journal.pgen.1010608

A monocarboxylate transporter rescues frontotemporal dementia and Alzheimer’s disease models

Dongwei Xu, Alec Vincent, Andrés González-Gutiérrez, Benjamin Aleyakpo, Sharifah Anoar, Ashling Giblin, Magda L. Atilano, Mirjam Adams, Dunxin Shen, Annora Thoeng, Elli Tsintzas, Marie Maeland, Adrian M. Isaacs, Jimena Sierralta, Teresa Niccoli

PLOS Genetics: published September 21, 2023 | https://doi.org/10.1371/journal.pgen.1010893

Non-gonadal somatic piRNA pathways ensure sexual differentiation, larval growth, and wing development in silkworms

Takashi Kiuchi, Keisuke Shoji, Natsuko Izumi, Yukihide Tomari, Susumu Katsuma

PLOS Genetics: published September 21, 2023 | https://doi.org/10.1371/journal.pgen.1010912

Methionine biosynthesis enzyme MoMet2 is required for rice blast fungus pathogenicity by promoting virulence gene expression via reducing 5mC modification

Huimin Li, Pengcheng Mo, Jun Zhang, Zhuoer Xie, Xinyu Liu, Han Chen, Leiyun Yang, Muxing Liu, Haifeng Zhang, Ping Wang, Zhengguang Zhang

PLOS Genetics: published September 21, 2023 | https://doi.org/10.1371/journal.pgen.1010927

Cell cycle-dependent organization of a bacterial centromere through multi-layered regulation of the ParABS system

Jovana Kaljević, Coralie Tesseur, Tung B. K. Le, Géraldine Laloux

PLOS Genetics: published September 21, 2023 | https://doi.org/10.1371/journal.pgen.1010951

Identification and analysis of individuals who deviate from their genetically-predicted phenotype

Gareth Hawkes, Loic Yengo, Sailaja Vedantam, Eirini Marouli, Robin N. Beaumont, the GIANT Consortium, Jessica Tyrrell, Michael N. Weedon, Joel Hirschhorn, Timothy M. Frayling, Andrew R. Wood

PLOS Genetics: published September 21, 2023 | https://doi.org/10.1371/journal.pgen.1010934

Neuronal expression in Drosophila of an evolutionarily conserved metallophosphodiesterase reveals pleiotropic roles in longevity and odorant response

Kriti Gupta, Sveta Chakrabarti, Vishnu Janardan, Nishita Gogia, Sanghita Banerjee, Swarna Srinivas, Deepthi Mahishi, Sandhya S. Visweswariah

PLOS Genetics: published September 21, 2023 | https://doi.org/10.1371/journal.pgen.1010962

Large-scale whole exome sequencing studies identify two genes,CTSL and APOE, associated with lung cancer

Jingxiong Xu, Wei Xu, Jiyeon Choi, Yonathan Brhane, David C. Christiani, Jui Kothari, James McKay, John K. Field, Michael P. A. Davies, Geoffrey Liu, Christopher I. Amos, Rayjean J. Hung, Laurent Briollais

PLOS Genetics: published September 22, 2023 | https://doi.org/10.1371/journal.pgen.1010902

Abnormal outer hair cell efferent innervation in Hoxb1-dependent sensorineural hearing loss

Maria Di Bonito, Jérôme Bourien, Monica Tizzano, Anne-Gabrielle Harrus, Jean-Luc Puel, Bice Avallone, Regis Nouvian, Michèle Studer

PLOS Genetics: published September 22, 2023 | https://doi.org/10.1371/journal.pgen.1010933

H4K20me3 is important for Ash1-mediated H3K36me3 and transcriptional silencing in facultative heterochromatin in a fungal pathogen

Mareike Möller, John B. Ridenour, Devin F. Wright, Faith A. Martin, Michael Freitag

PLOS Genetics: published September 25, 2023 | https://doi.org/10.1371/journal.pgen.1010945

TDP-43 pathology in Drosophila induces glial-cell type specific toxicity that can be ameliorated by knock-down of SF2/SRSF1

Sarah Krupp, Isabel Hubbard, Oliver Tam, Gale M. Hammell, Josh Dubnau

PLOS Genetics: published September 25, 2023 | https://doi.org/10.1371/journal.pgen.1010973

Human genetic adaptation related to cellular zinc homeostasis

Ana Roca-Umbert, Jorge Garcia-Calleja, Marina Vogel-González, Alejandro Fierro-Villegas, Gerard Ill-Raga, Víctor Herrera-Fernández, Anja Bosnjak, Gerard Muntané, Esteban Gutiérrez, Felix Campelo, Rubén Vicente, Elena Bosch

PLOS Genetics: published September 25, 2023 | https://doi.org/10.1371/journal.pgen.1010950

Spatial regulation of Drosophila ovarian Follicle Stem Cell division rates and cell cycle transitions

David Melamed, Aaron Choi, Amy Reilein, Simon Tavaré, Daniel Kalderon

PLOS Genetics: published September 25, 2023 | https://doi.org/10.1371/journal.pgen.1010965

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Chromatin accessibility, not 5mC methylation covaries with partial dosage compensation in crows

Ana Catalán, Justin Merondun, Ulrich Knief, Jochen B. W. Wolf

PLOS Genetics: published September 25, 2023 | https://doi.org/10.1371/journal.pgen.1010901

Notch pathway mutants do not equivalently perturb mouse embryonic retinal development

Bernadett Bosze, Julissa Suarez-Navarro, Illiana Cajias, Joseph A. Brzezinski IV, Nadean L. Brown

PLOS Genetics: published September 26, 2023 | https://doi.org/10.1371/journal.pgen.1010928

A digital twin reproducing gene regulatory network dynamics of early Ciona embryos indicates robust buffers in the network

Miki Tokuoka, Yutaka Satou

PLOS Genetics: published September 27, 2023 | https://doi.org/10.1371/journal.pgen.1010953

RBMX involves in telomere stability maintenance by regulating TERRA expression

Jingfan Liu, Tian Zheng, Dandan Chen, Junjiu Huang, Yong Zhao, Wenbin Ma, Haiying Liu

PLOS Genetics: published September 27, 2023 | https://doi.org/10.1371/journal.pgen.1010937

A double-negative feedback loop between miR319c and JAW-TCPs establishes growth pattern in incipient leaf primordia in Arabidopsis thaliana

Naveen Shankar, Preethi Sunkara, Utpal Nath

PLOS Genetics: published September 28, 2023 | https://doi.org/10.1371/journal.pgen.1010978

Adenylosuccinate lyase deficiency affects neurobehavior via perturbations to tyramine signaling in Caenorhabditis elegans

Corinna A. Moro, Sabrina A. Sony, Latisha P. Franklin, Shirley Dong, Mia M. Peifer, Kathryn E. Wittig, Wendy Hanna-Rose

PLOS Genetics: published September 29, 2023 | https://doi.org/10.1371/journal.pgen.1010974

Correction: A novel nematode species from the Siberian permafrost shares adaptive mechanisms for cryptobiotic survival with C. elegans dauer larva

The PLOS Genetics Staff

PLOS Genetics: published September 14, 2023 | https://doi.org/10.1371/journal.pgen.1010943

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1. A novel nematode species from the Siberian permafrost shares adaptive mechanisms for cryptobiotic survival with C. elegans dauer larva

Correction: A role for brassinosteroid signalling in decision-making processes in the Arabidopsis seedling

Nils Kalbfuß, Alexander Strohmayr, Marcel Kegel, Lien Le, Friederike Grosse-Holz, Barbara Brunschweiger, Katharina Stöckl, Christian Wiese, Carina Franke, Caroline Schiestl, Sophia Prem, Shuyao Sha, Katrin Franz-Oberdorf, Juliane Hafermann, Marc Thiemé, Eva Facher, Wojciech Palubicki, Cordelia Bolle, Farhah F. Assaad

PLOS Genetics: published September 27, 2023 | https://doi.org/10.1371/journal.pgen.1010970

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Expression of Concern: MiR172-APETALA2-like genes integrate vernalization and plant age to control flowering time in wheat

The PLOS Genetics Editors

PLOS Genetics: published September 19, 2023 | https://doi.org/10.1371/journal.pgen.1010956

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1. MiR172-APETALA2-like genes integrate vernalization and plant age to control flowering time in wheat

Expression of Concern: PHYTOCHROME C regulation of photoperiodic flowering via PHOTOPERIOD1 is mediated by EARLY FLOWERING 3 in Brachypodium distachyon

The PLOS Genetics Editors

PLOS Genetics: published September 19, 2023 | https://doi.org/10.1371/journal.pgen.1010955

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1. PHYTOCHROME C regulation of photoperiodic flowering via PHOTOPERIOD1 is mediated by EARLY FLOWERING 3 in Brachypodium distachyon

Inferring gene regulatory network from single-cell transcriptomes with graph autoencoder model

Jiacheng Wang, Yaojia Chen, Quan Zou

PLOS Genetics: published September 13, 2023 | https://doi.org/10.1371/journal.pgen.1010942