Peer Review History
| Original SubmissionApril 15, 2025 |
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PGENETICS-D-25-00453 Genetic underpinnings of chills from art and music PLOS Genetics Dear Dr. Bignardi, Thank you for submitting your manuscript to PLOS Genetics. After careful consideration, we feel that it has merit but does not fully meet PLOS Genetics's publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. Please submit your revised manuscript within 60 days Aug 19 2025 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosgenetics@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pgenetics/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. Please include the following items when submitting your revised manuscript: * A rebuttal letter that responds to each point raised by the editor and reviewer(s). You should upload this letter as a separate file labeled 'Response to Reviewers'. This file does not need to include responses to any formatting updates and technical items listed in the 'Journal Requirements' section below. * A marked-up copy of your manuscript that highlights changes made to the original version. You should upload this as a separate file labeled 'Revised Manuscript with Track Changes'. * An unmarked version of your revised paper without tracked changes. You should upload this as a separate file labeled 'Manuscript'. If you would like to make changes to your financial disclosure, competing interests statement, or data availability statement, please make these updates within the submission form at the time of resubmission. Guidelines for resubmitting your figure files are available below the reviewer comments at the end of this letter. We look forward to receiving your revised manuscript. Kind regards, Zihuai He Academic Editor PLOS Genetics Santhosh Girirajan Section Editor PLOS Genetics Aimée Dudley Editor-in-Chief PLOS Genetics Anne Goriely Editor-in-Chief PLOS Genetics Journal Requirements: 1) We ask that a manuscript source file is provided at Revision. Please upload your manuscript file as a .doc, .docx, .rtf or .tex. If you are providing a .tex file, please upload it under the item type u2018LaTeX Source Fileu2019 and leave your .pdf version as the item type u2018Manuscriptu2019. 2) Please provide an Author Summary. This should appear in your manuscript between the Abstract (if applicable) and the Introduction, and should be 150-200 words long. The aim should be to make your findings accessible to a wide audience that includes both scientists and non-scientists. 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Reviewers' comments: Reviewer's Responses to Questions Comments to the Authors: Please note here if the review is uploaded as an attachment. Reviewer #1: Thank you for the opportunity to review this interesting manuscript. This paper reports a novel genomic analysis of proneness to chills, including aesthetic and music chills and their overlap. The paper was very well-written and the methodology was rigorous. I have a few comments, but I don’t view any of them as major concerns, so I support the publication of this manuscript. Abstract: “data for more than 100 million pairs of individuals” is kind of misleading since you already stated the sample size and there are only 15k unique individuals in the dataset. I think you should remove this phrase. Method: Although you may be restricted by the word limit, I was hoping to see a little more basic information about the Lifelines study, including when the sample was recruited, how the questionnaires were administered, and whether there is any reason to expect selection bias played a role in these results (e.g., based on which subsets of subjects completed the BMRQ and where genotyped, both of which were much smaller than the total sample). More importantly, it would be helpful for the authors to be clearer about how many related individuals are included in the final sample. I’m flexible on how to approach this, but it would nice to at least know how many 1st or 2nd degree relatives comprised the final 15k sample. Are there any twins in this dataset? Some information is reported in the PGI section (see comment below) but I think it should be mentioned in a different place than the PGI section. PGI analyses: why exclude individuals related greater than the 3rd degree? These individuals all have unique PGIs and phenotype data, and you could cluster the data by family using standard approaches that would adjust standard errors for such clustering. My understanding is that this would enable the use of all possible data in these analyses and should therefore result in more accurate estimates (especially since it’s about 4k extra individuals!). However, if there is a reason to avoid including related individuals in this analysis, please explain. “The remaining GWAS cohorts that contributed to the meta-analyses included summary statistics from OE scores derived from 12 to 48 items…” I don’t see the acronym “OE” described elsewhere so I think this needs to be explained. It was also unclear if data from these individuals were included in the PGI or not. Please clarify. Finally, I worry that the description of the PGI as ‘genetic predispositions towards art’ is not entirely accurate. I appreciate the authors efforts to hone in on items from the openness to experience GWAS and the reverse coded item about artistic interests makes a lot of sense. I’m just not sure I agree that describing yourself as “someone who has an active imagination” is concretely linked to predisposition towards art (e.g., many artists work only from models or what they are seeing, etc.). I suggest either removing the second item or adding some further justification that these items are really genetically linked (e.g., a strong genetic correlation with item #1 would be sufficient). This comment is still considered relatively minor as it is addressed in the limitations paragraph. Discussion: The other limitations of the study were discussed well, and I found the discussion of the differences between SNP and pedigree heritability very useful. One note is that the heritability estimates are quite high considering that these were based on individual items. You may want to state that these might actually be underestimates of the true heritability (e.g., given that there is likely more measurement error on a single item than if you had looked at an entire questionnaire). Reviewer #2: The authors of this manuscript aim to explore the genetic underpinnings of "chills," a physiological response often associated with emotional or environmental stimuli. By leveraging heritability analyses and linear mixed models, the authors seek to quantify the genetic contributions to chills and provide insights into their biological mechanisms. Major Comments 1. Environmental and Cultural Influences on Chills While the study provides valuable insights into the heritability of chills, the authors appear to underestimate the influence of environmental and cultural factors. Chills are not purely genetically driven; family culture, upbringing, and environmental factors likely serve as significant upstream regulators. The hypothesis attributing chills primarily to genetic factors needs more robust justification. o It is essential to adjust for environmental factors, such as family culture, in the heritability models. o The manuscript would benefit from the addition of a “control arm,” comprising individuals from families without such cultural predispositions to chills. This would allow a more direct assessment of genetic versus environmental contributions. o The authors should explicitly justify their hypothesis by first demonstrating that genetic factors, rather than environmental ones, primarily drive the observed phenomena. Addressing this issue at the outset will strengthen the foundation of the study. 2. Unveiling the Underlying Mechanisms While the heritability estimates provide a starting point, the manuscript lacks an in-depth exploration of the molecular mechanisms underlying chills. Identifying associated genes, pathways, and biomarkers is crucial for understanding their genetic basis. o A genome-wide association study (GWAS) or similar approach to identify specific SNPs and pathways associated with chills is strongly recommended. o Mapping these genetic factors to relevant KEGG pathways or other molecular networks could illuminate potential biological mechanisms and enhance the translational value of the findings. 3. Longitudinal Nature of Chills Unlike static genetic traits, chills are likely dynamic and influenced by time-varying factors such as age, mood, and environmental conditions. The authors should account for these temporal variations in their analysis. o A longitudinal study design that tracks changes in the frequency or intensity of chills over time would provide a more comprehensive understanding. o Confounding variables such as cohort, gender, and environmental exposures should be carefully adjusted in any longitudinal analysis. o This approach would also help distinguish between genetic predispositions and environmental triggers, further bolstering the study’s findings. Summary and Suggestions Overall, this manuscript addresses an intriguing question about the genetic basis of chills. However, it would be significantly improved by incorporating adjustments for environmental factors, expanding the analysis to explore molecular mechanisms, and adopting a longitudinal framework to capture the dynamic nature of chills. These refinements would make the study more robust and enhance its scientific and practical impact. Reviewer #3: Review is uploaded as an attachment ********** Have all data underlying the figures and results presented in the manuscript been provided? Large-scale datasets should be made available via a public repository as described in the PLOS Genetics data availability policy , and numerical data that underlies graphs or summary statistics should be provided in spreadsheet form as supporting information. Reviewer #1: Yes Reviewer #2: None Reviewer #3: None ********** PLOS authors have the option to publish the peer review history of their article (what does this mean? ). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy . Reviewer #1: Yes: Daniel Gustavson Reviewer #2: Yes: Xinran Qi Reviewer #3: No [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] Figure resubmission: While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. 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| Revision 1 |
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PGENETICS-D-25-00453R1 Genetic underpinnings of chills from art and music PLOS Genetics Dear Dr. Bignardi, Thank you for submitting your manuscript to PLOS Genetics. After careful consideration, we feel that it has merit but does not fully meet PLOS Genetics's publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. Please submit your revised manuscript within by Dec 19 2025 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosgenetics@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pgenetics/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. Please include the following items when submitting your revised manuscript: * A rebuttal letter that responds to each point raised by the editor and reviewer(s). You should upload this letter as a separate file labeled 'Response to Reviewers'. This file does not need to include responses to formatting updates and technical items listed in the 'Journal Requirements' section below. * A marked-up copy of your manuscript that highlights changes made to the original version. You should upload this as a separate file labeled 'Revised Manuscript with Track Changes'. * An unmarked version of your revised paper without tracked changes. You should upload this as a separate file labeled 'Manuscript'. If you would like to make changes to your financial disclosure, competing interests statement, or data availability statement, please make these updates within the submission form at the time of resubmission. Guidelines for resubmitting your figure files are available below the reviewer comments at the end of this letter. We look forward to receiving your revised manuscript. Kind regards, Zihuai He Academic Editor PLOS Genetics Santhosh Girirajan Section Editor PLOS Genetics Aimée Dudley Editor-in-Chief PLOS Genetics Anne Goriely Editor-in-Chief PLOS Genetics Journal Requirements: We have noticed that you have uploaded Supporting Information files, but you have not included a list of legends. Please add a full list of legends for your Supporting Information files after the references list. Reviewers' comments: Reviewer's Responses to Questions Comments to the Authors: Please note here if the review is uploaded as an attachment. Reviewer #2: I appreciate the authors’ extensive and thoughtful responses to the first-round reviews. The revisions significantly strengthen the manuscript, and many of my earlier concerns have been satisfactorily addressed. The clarification of the Lifelines sampling structure, the expanded methodological explanations for GREML and PGI analyses, and the enriched discussion about environmental influences, assortative mating, and measurement error all improve the clarity and interpretability of the results. Below I provide a brief assessment of how well each of my original major comments has been addressed, followed by a few remaining issues that would still benefit from clarification before publication. Major Points Addressed 1. Environmental and cultural influences on chills The authors now clearly articulate that chills are influenced by both genetic and non-genetic factors and provide supporting evidence from prior twin studies demonstrating minimal shared environmental effects. They also explain why conditioning on environmental variables or restricting families would bias heritability estimation. This sufficiently resolves my original concern. 2. Mechanistic (molecular) interpretation While a GWAS was not added, the authors provide a reasonable justification for why the current sample size and design are insufficient for pathway-level work. They appropriately frame this as future work. This is acceptable. 3. Temporal / longitudinal considerations The new discussion of test–retest reliability, age/sex effects, and how within-person variability biases heritability downward is helpful and sufficient for a cross-sectional genetic design. Overall, the authors have addressed the primary conceptual concerns. Remaining Issues That Need Further Attention Before Acceptance Although the manuscript is now much improved, a few points remain incompletely resolved or still require clarification in the main text (not only in the response letter). Addressing these will ensure proper alignment between the revised manuscript and the authors' explanations. 1. The justification for the PGI interpretation is still somewhat overstated Although the authors softened the language, the PGI is still described as capturing “openness to experience, including propensities towards art.” The PGI includes multiple openness subdomains, many unrelated to artistic inclination (e.g., imagination, curiosity, unconventionality). Remaining concern: The manuscript still risks implying that the PGI specifically indexes “artistic predisposition,” even though this is only one component of the underlying GWAS. Suggestion: Clarify in the Results and Discussion that: the PGI captures broad openness-related variation, of which artistic interest is only one facet, and the PGI should not be interpreted as uniquely or predominantly indexing artistic predisposition. This is already hinted at in the response letter but should be stated explicitly in the manuscript text. 2. The manuscript now uses \pi < .05 as the main relatedness threshold, but the justification still feels fragmented The response letter provides a thorough explanation, but the main text of the manuscript still does not fully explain: (a) Why \pi < .05 is now the primary choice (b) Why \pi < .02 is retained only as a sensitivity analysis (c) How this aligns with best practices and the cited recommendations (d) Why GREML estimates are stable across thresholds Suggestion: Add one or two clarifying sentences in the Methods summarizing this rationale (instead of relying solely on Supplementary Table S2), so future readers do not need to infer it from the supplementary materials. 3. Slight overstatement of novelty regarding cross-modal genetic correlation The authors claim there was previously a “complete lack of evidence” for whether genetic effects on aesthetic chills extend to music. While true for molecular genetic studies, prior twin studies (including those by the first author) have already demonstrated overlapping heritable components of emotional response to aesthetic stimuli. Suggestion: Rephrase slightly to reflect that the novelty lies in molecular genetic estimation, not the broader behavioral-genetic domain. 4. The discussion of gene-by-shared-environment interaction is new but still somewhat abstract The manuscript now raises the possibility that G×shared environment interaction could inflate pedigree-based estimates, but the logic remains difficult to follow because: (a) No empirical test is performed (b) No specific candidate shared environments are discussed (c) The implications for interpreting the numeric difference between h²_SNP and h²_ped remain vague Suggestion: Add one sentence clarifying the practical takeaway for readers, e.g.: “…although we cannot fully distinguish G×shared environment interaction from non-additive genetic variance using the current design, the stability of estimates across sensitivity analyses suggests that such effects, if present, are unlikely to be large.” 5. The revised manuscript is long and complex; some parts would benefit from clearer figure/table guidance This is not an error, but a readability refinement. For example: Supplementary Table S3 (relatedness distribution) is central and could be referenced more prominently. The PGI analyses (two approaches) could benefit from a short schematic or summary table. This would greatly help readers unfamiliar with GREML + PGI hybrid designs. Conclusion Overall, the authors have substantially improved the manuscript and addressed nearly all major concerns from the first review round. The study is carefully executed, methodologically sound, and provides a valuable contribution to the literature on the genetic architecture of emotional responses to art and music. Reviewer #3: I have no more questions. All my comments are fully addressed in revised manuscript. ********** Have all data underlying the figures and results presented in the manuscript been provided? Large-scale datasets should be made available via a public repository as described in the PLOS Genetics data availability policy , and numerical data that underlies graphs or summary statistics should be provided in spreadsheet form as supporting information. Reviewer #2: Yes Reviewer #3: Yes ********** PLOS authors have the option to publish the peer review history of their article (what does this mean? ). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy . Reviewer #2: Yes: Xinran Qi Reviewer #3: No [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] Figure resubmission: Reproducibility: To enhance the reproducibility of your results, we recommend that authors deposit laboratory protocols in protocols.io, where a protocol can be assigned its own identifier (DOI) such that it can be cited independently in the future. Additionally, PLOS ONE offers an option to publish peer-reviewed clinical study protocols. Read more information on sharing protocols at https://plos.org/protocols?utm_medium=editorial-email&utm_source=authorletters&utm_campaign=protocols |
| Revision 2 |
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Dear Dr Bignardi, We are pleased to inform you that your manuscript entitled "Genetic underpinnings of chills from art and music" has been editorially accepted for publication in PLOS Genetics. Congratulations! Before your submission can be formally accepted and sent to production you will need to complete our formatting changes, which you will receive in a follow up email. Please be aware that it may take several days for you to receive this email; during this time no action is required by you. Please note: the accept date on your published article will reflect the date of this provisional acceptance, but your manuscript will not be scheduled for publication until the required changes have been made. Once your paper is formally accepted, an uncorrected proof of your manuscript will be published online ahead of the final version, unless you’ve already opted out via the online submission form. If, for any reason, you do not want an earlier version of your manuscript published online or are unsure if you have already indicated as such, please let the journal staff know immediately at plosgenetics@plos.org. In the meantime, please log into Editorial Manager at https://www.editorialmanager.com/pgenetics/, click the "Update My Information" link at the top of the page, and update your user information to ensure an efficient production and billing process. Note that PLOS requires an ORCID iD for all corresponding authors. Therefore, please ensure that you have an ORCID iD and that it is validated in Editorial Manager. To do this, go to ‘Update my Information’ (in the upper left-hand corner of the main menu), and click on the Fetch/Validate link next to the ORCID field. This will take you to the ORCID site and allow you to create a new iD or authenticate a pre-existing iD in Editorial Manager. If you have a press-related query, or would like to know about making your underlying data available (as you will be aware, this is required for publication), please see the end of this email. If your institution or institutions have a press office, please notify them about your upcoming article at this point, to enable them to help maximise its impact. Inform journal staff as soon as possible if you are preparing a press release for your article and need a publication date. Thank you again for supporting open-access publishing; we are looking forward to publishing your work in PLOS Genetics! Yours sincerely, Zihuai He Academic Editor PLOS Genetics Santhosh Girirajan Section Editor PLOS Genetics Aimée Dudley Editor-in-Chief PLOS Genetics Anne Goriely Editor-in-Chief PLOS Genetics BlueSky: @plos.bsky.social ---------------------------------------------------- Comments from the reviewers (if applicable): ---------------------------------------------------- Data Deposition If you have submitted a Research Article or Front Matter that has associated data that are not suitable for deposition in a subject-specific public repository (such as GenBank or ArrayExpress), one way to make that data available is to deposit it in the Dryad Digital Repository . As you may recall, we ask all authors to agree to make data available; this is one way to achieve that. A full list of recommended repositories can be found on our website . The following link will take you to the Dryad record for your article, so you won't have to re‐enter its bibliographic information, and can upload your files directly: http://datadryad.org/submit?journalID=pgenetics&manu=PGENETICS-D-25-00453R2 More information about depositing data in Dryad is available at http://www.datadryad.org/depositing. If you experience any difficulties in submitting your data, please contact help@datadryad.org for support. Additionally, please be aware that our data availability policy requires that all numerical data underlying display items are included with the submission, and you will need to provide this before we can formally accept your manuscript, if not already present. ---------------------------------------------------- Press Queries If you or your institution will be preparing press materials for this manuscript, or if you need to know your paper's publication date for media purposes, please inform the journal staff as soon as possible so that your submission can be scheduled accordingly. Your manuscript will remain under a strict press embargo until the publication date and time. This means an early version of your manuscript will not be published ahead of your final version. PLOS Genetics may also choose to issue a press release for your article. If there's anything the journal should know or you'd like more information, please get in touch via plosgenetics@plos.org . |
| Formally Accepted |
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PGENETICS-D-25-00453R2 Genetic underpinnings of chills from art and music Dear Dr Bignardi, We are pleased to inform you that your manuscript entitled "Genetic underpinnings of chills from art and music" has been formally accepted for publication in PLOS Genetics! Your manuscript is now with our production department and you will be notified of the publication date in due course. The corresponding author will soon be receiving a typeset proof for review, to ensure errors have not been introduced during production. Please review the PDF proof of your manuscript carefully, as this is the last chance to correct any errors. Please note that major changes, or those which affect the scientific understanding of the work, will likely cause delays to the publication date of your manuscript. Soon after your final files are uploaded, unless you have opted out or your manuscript is a front-matter piece, the early version of your manuscript will be published online. The date of the early version will be your article's publication date. The final article will be published to the same URL, and all versions of the paper will be accessible to readers. For Research Articles, you will receive an invoice from PLOS for your publication fee after your manuscript has reached the completed accept phase. If you receive an email requesting payment before acceptance or for any other service, this may be a phishing scheme. Learn how to identify phishing emails and protect your accounts at https://explore.plos.org/phishing. Thank you again for supporting PLOS Genetics and open-access publishing. We are looking forward to publishing your work! With kind regards, Judit Kozma PLOS Genetics On behalf of: The PLOS Genetics Team Carlyle House, Carlyle Road, Cambridge CB4 3DN | United Kingdom plosgenetics@plos.org | +44 (0) 1223-442823 plosgenetics.org | Twitter: @PLOSGenetics |
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