Peer Review History
| Original SubmissionNovember 19, 2019 |
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* Please note while forming your response, if your article is accepted, you may have the opportunity to make the peer review history publicly available. The record will include editor decision letters (with reviews) and your responses to reviewer comments. If eligible, we will contact you to opt in or out. * Dear Dr Kang, Thank you very much for submitting your Research Article entitled 'Tryptamine accumulation caused by deletion of MrMao-1 in Metarhizum genome significantly promotes insecticidal virulence' to PLOS Genetics. Your manuscript was fully evaluated at the editorial level and by independent peer reviewers. The reviewers appreciated the attention to an important topic but identified some aspects of the manuscript that should be improved. We therefore ask you to modify the manuscript according to the review recommendations before we can consider your manuscript for acceptance. Your revisions should address the specific points made by each reviewer. In addition we ask that you: 1) Provide a detailed list of your responses to the review comments and a description of the changes you have made in the manuscript. 2) Upload a Striking Image with a corresponding caption to accompany your manuscript if one is available (either a new image or an existing one from within your manuscript). If this image is judged to be suitable, it may be featured on our website. Images should ideally be high resolution, eye-catching, single panel square images. For examples, please browse our archive. If your image is from someone other than yourself, please ensure that the artist has read and agreed to the terms and conditions of the Creative Commons Attribution License. Note: we cannot publish copyrighted images. We hope to receive your revised manuscript within the next 30 days. If you anticipate any delay in its return, we would ask you to let us know the expected resubmission date by email to plosgenetics@plos.org. If present, accompanying reviewer attachments should be included with this email; please notify the journal office if any appear to be missing. They will also be available for download from the link below. You can use this link to log into the system when you are ready to submit a revised version, having first consulted our Submission Checklist. While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email us at figures@plos.org. Please be aware that our data availability policy requires that all numerical data underlying graphs or summary statistics are included with the submission, and you will need to provide this upon resubmission if not already present. In addition, we do not permit the inclusion of phrases such as "data not shown" or "unpublished results" in manuscripts. All points should be backed up by data provided with the submission. PLOS has incorporated Similarity Check, powered by iThenticate, into its journal-wide submission system in order to screen submitted content for originality before publication. Each PLOS journal undertakes screening on a proportion of submitted articles. You will be contacted if needed following the screening process. To resubmit, you will need to go to the link below and 'Revise Submission' in the 'Submissions Needing Revision' folder. [LINK] Please let us know if you have any questions while making these revisions. Yours sincerely, Jens Rolff Guest Editor PLOS Genetics Gregory P. Copenhaver Editor-in-Chief PLOS Genetics Pest species such as locusts cause major losses of harvest. One important control measure for pest insects and diseases vectors are Mycoinsecticides, fungi that are professional insect pathogens. How and why some these fungi kill their insect hosts and whether this can be harnessed for control measures is studied in this article. The authors compare the virulence between the host-specialist fungus Metarhizium acridumn (MAC) and the generalist Metarhizium robertsii (MAA). They find that the specialist is more virulent and that this virulence is caused by tryptamine. A genomic comparison shows that MAC are devoid of an important that catabolizes tryptamine. They then study the immune response of the host and can show that tryptamine elicits a damaging reactive oxygen response in the host and also suppresses the expression of defensins. They also recreate the virulent tryptamine producing genotype in MAA and find the same virulence as in MAC. Overall, this is a very complete story of understanding the virulence of the fungus and the killing mechanism of the host. The authors also point out how that insight can be utilized for controls. The paper in general is easy to follow and well structured. The paper would nevertheless benefit from polishing the language. Reviewer 2 provides a number of points that should be closely adhered to, including the access to the data. For readers not familiar with pest control it would be useful to have one or two sentences on the importance of insect pests or in particular locusts. In the discussion I feel it should addressed that a more virulent entomopathogen would not only infect the target host, but basically all insects. How is this problem going to be resolved? See perhaps the comments on Lovett et al 2019 Science. Some minor comments. Line 105-107: statement unclear Line 779-781 is unclear to me and does not seem to match the main text. Line 325-327 meaning unclear. Reviewer's Responses to Questions Comments to the Authors: Please note here if the review is uploaded as an attachment. Reviewer #1: Well written and well thought out experimental design. The only thing I would suggest is to check the grammar and syntax throughout the manuscript. Reviewer #2: Article Under Review: Tryptamine accumulation caused by deletion of MrMao-1 in Metarhizium genome significantly promotes insecticidal virulence Summary: In this study, the authors carefully characterize the high amount of tryptamine production by the specialist insect pathogenic fungus Metarhizium acridum, as compared to the generalist pathogen Metarhizium robertsii. They further convincingly link the production of tryptamine higher virulence by the specialist toward locusts, which is mediated by ROS accumulation via LmAhR. Through comparative genomics and transcriptomics, they discovered the tryptamine accumulation in the specialist is due to its lack of a monoamine oxidase gene required for tryptamine catabolism. This finding led to the production of a strain of M. robertsii wherein they deleted this gene. This mutant recapitulated the increased virulence and increased ROS seen in M. acridum, but irrespective of insect host. It seems they have uncovered a tryptamine-mediated path to enhanced virulence in pathogenic fungi with applicability in a wide range of insects. They rightly highlight that this method would not require transgenesis, as it could be accomplished through gene deletion. Comments: Ln 32: Throughout, is it more correct to say “inducing” instead of “regulating”? Ln 46: I suggest referring to “MAA” as “MRO” throughout for consistency. Ln 144: Please indicate which solvent you used to make your spore suspension. Ln 152-154: Is it more appropriate to say “up-regulated” instead of “expressed”, “triggered” and “activated”? Ln 155-156: Does this section of the Venn Diagram really show this? Did you limit your MAA vs. MAC comparisons to only MAC genes? Please make this more clear. Ln 185-188: These accession numbers do not pull up anything on NCBI, please check these. Ln 252: Fascinating! Ln 327: I recommend explicitly stating that this will be advantageous from a regulatory perspective. Ln 342-344: What does this sentence mean? Ln 345: Add a citation to justify “hasten the recycling of tryptophan from insects to plants”. Ln 355: This sentence seems to switch the order of AhR and ROS stress. Consider rewording. Ln 379: Your diagram suggests TDC, not Mao, is involved in the conversion tryptamine from tryptophan. Ln 382-388: Why would the generalist be better adapted to insects than the specialist? Also, why would the specialist be better adapted to plants? Generalists tend to be better plant symbionts than specialists. This section needs to be removed or rethought. Ln 391: This statement about HGT is unfounded speculation, particularly considering how closely related Pochonia chlamydosporia and Metarhizium species are. Please remove. Ln 308-409: Please add a citation to back up this statement. Fig 1: Consider reporting percent survival on the y-axis instead of log rank throughout. Also, consider using colorblind-friendly coloration. Suggested Revisions: Ln 2: change “promotes” to “enhances” Ln 37: add space after “insects.” Ln 42: remove “traditional” Ln 43: change “is a fungus that” to “fungi” Ln 44: change “lives” to “live”; change “produces” to “can produce” Ln 50: add comma after “destruxins” Ln 63: change “these” to “the” Ln 64: change “safe” to “their safety” Ln 70: change “its” to “their”; change “it” to “they”; change “differentiates” to “differentiate” Ln 79: add comma after “hosts” Ln 82: change “germling” to “germlings” Ln 85: add “cuticular” before “penetration”; change “has” to “have” Ln 86: change “its” to “their”; remove “the” before “virulence” Ln 87: remove “of its pathogens” Ln 94: change “in charge of” to “required for” Ln 96: remove “enzymes” Ln 108: change “while” to “during”; swap “MAA” and “locusts” Ln 125: add “the” after “that” Ln 127: add “the” after “whereas” Ln 132: change “multi-copies” to “multiple copies” Ln 135: add “factor” after “virulence” Ln 151: change “each time of” to “their respective” Ln 175: change “part” to “components” Ln 188: remove comma Ln 203: remove “the” Ln 216: change “nuclei” to “nucleus” Ln 235: change “missed” to “lacks the” Ln 236: remove “a”; capitalize “Quantification”; remove “analysis”; remove “the” after “in” Ln 335: change “destruxins” to “destruxin” Ln 337: change “plant” to “plants” Ln 346: change “plant” to “plants” Ln 352: change “confirmed” to “investigated” Ln 364: change “damages in” to “damage to” Ln 373: add period after “spp” Ln 408: replace “horizontal gene” with “transgene” Ln 420: remove “after” Ln 421: change “of” to “after” Ln 482: write O.C.T. in full Ln 532: change “Drug” to “Tryptamine” Ln 607: change “P value” to “p-value” ********** Have all data underlying the figures and results presented in the manuscript been provided? Large-scale datasets should be made available via a public repository as described in the PLOS Genetics data availability policy, and numerical data that underlies graphs or summary statistics should be provided in spreadsheet form as supporting information. Reviewer #1: Yes Reviewer #2: Yes ********** PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: Yes: MJBidochka Reviewer #2: No |
| Revision 1 |
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* Please note while forming your response, if your article is accepted, you may have the opportunity to make the peer review history publicly available. The record will include editor decision letters (with reviews) and your responses to reviewer comments. If eligible, we will contact you to opt in or out. * Dear Dr Kang, Thank you very much for submitting your Research Article entitled 'Tryptamine accumulation caused by deletion of MrMao-1 in Metarhizum genome significantly enhances insecticidal virulence' to PLOS Genetics. Your manuscript was fully evaluated at the editorial level. We therefore ask you to modify the manuscript according to the minor recommendations by the associate editor (see below) before we can consider your manuscript for acceptance. Your revisions should address the specific points made by each reviewer. In addition we ask that you: Upload a Striking Image with a corresponding caption to accompany your manuscript if one is available (either a new image or an existing one from within your manuscript). If this image is judged to be suitable, it may be featured on our website. Images should ideally be high resolution, eye-catching, single panel square images. For examples, please browse our archive. If your image is from someone other than yourself, please ensure that the artist has read and agreed to the terms and conditions of the Creative Commons Attribution License. Note: we cannot publish copyrighted images. We hope to receive your revised manuscript within the next 30 days. If you anticipate any delay in its return, we would ask you to let us know the expected resubmission date by email to plosgenetics@plos.org. If present, accompanying reviewer attachments should be included with this email; please notify the journal office if any appear to be missing. They will also be available for download from the link below. You can use this link to log into the system when you are ready to submit a revised version, having first consulted our Submission Checklist. While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email us at figures@plos.org. Please be aware that our data availability policy requires that all numerical data underlying graphs or summary statistics are included with the submission, and you will need to provide this upon resubmission if not already present. In addition, we do not permit the inclusion of phrases such as "data not shown" or "unpublished results" in manuscripts. All points should be backed up by data provided with the submission. PLOS has incorporated Similarity Check, powered by iThenticate, into its journal-wide submission system in order to screen submitted content for originality before publication. Each PLOS journal undertakes screening on a proportion of submitted articles. You will be contacted if needed following the screening process. To resubmit, you will need to go to the link below and 'Revise Submission' in the 'Submissions Needing Revision' folder. [LINK] Please let us know if you have any questions while making these revisions. Yours sincerely, Jens Rolff Guest Editor PLOS Genetics Gregory P. Copenhaver Editor-in-Chief PLOS Genetics The authors have done a great job. The paper is very close. There are a few places that should be corrected, which I think makes the paper easier to read: Line 88 I assume you mean specificity here, not specification Line 90-91 sentence unclear: is it meant that 15 % of all putative genes are virulence genes? Line 92 Do you mean ‘virulence genes’ here Line 198 replace than with compared to Lines 206-207: Rephrase. By comparing….., it was found that…. Line 214. …. To be between 1,585. – 20795 (put Cis in brackets) Line 225: insect ‘in insects’ after AhR Line 330 I think you mean ‘differences in’ here, rather than ‘diverse’? Line 334 showS Line 334 Relied instead of relayed Line 334 gene not genes Line 348 is expansive really meant, or expensive or widespread? |
| Revision 2 |
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Dear Dr Kang, We are pleased to inform you that your manuscript entitled "Tryptamine accumulation caused by deletion of MrMao-1 in Metarhizum genome significantly enhances insecticidal virulence" has been editorially accepted for publication in PLOS Genetics. Congratulations! Before your submission can be formally accepted and sent to production you will need to complete our formatting changes, which you will receive in a follow up email. Please be aware that it may take several days for you to receive this email; during this time no action is required by you. Please note: the accept date on your published article will reflect the date of this provisional accept, but your manuscript will not be scheduled for publication until the required changes have been made. Once your paper is formally accepted, an uncorrected proof of your manuscript will be published online ahead of the final version, unless you’ve already opted out via the online submission form. If, for any reason, you do not want an earlier version of your manuscript published online or are unsure if you have already indicated as such, please let the journal staff know immediately at plosgenetics@plos.org. In the meantime, please log into Editorial Manager at https://www.editorialmanager.com/pgenetics/, click the "Update My Information" link at the top of the page, and update your user information to ensure an efficient production and billing process. Note that PLOS requires an ORCID iD for all corresponding authors. Therefore, please ensure that you have an ORCID iD and that it is validated in Editorial Manager. To do this, go to ‘Update my Information’ (in the upper left-hand corner of the main menu), and click on the Fetch/Validate link next to the ORCID field. This will take you to the ORCID site and allow you to create a new iD or authenticate a pre-existing iD in Editorial Manager. If you have a press-related query, or would like to know about one way to make your underlying data available (as you will be aware, this is required for publication), please see the end of this email. If your institution or institutions have a press office, please notify them about your upcoming article at this point, to enable them to help maximise its impact. Inform journal staff as soon as possible if you are preparing a press release for your article and need a publication date. Thank you again for supporting open-access publishing; we are looking forward to publishing your work in PLOS Genetics! Yours sincerely, Jens Rolff Guest Editor PLOS Genetics Gregory P. Copenhaver Editor-in-Chief PLOS Genetics Twitter: @PLOSGenetics ---------------------------------------------------- Comments from the reviewers (if applicable): ---------------------------------------------------- Data Deposition If you have submitted a Research Article or Front Matter that has associated data that are not suitable for deposition in a subject-specific public repository (such as GenBank or ArrayExpress), one way to make that data available is to deposit it in the Dryad Digital Repository. As you may recall, we ask all authors to agree to make data available; this is one way to achieve that. A full list of recommended repositories can be found on our website. The following link will take you to the Dryad record for your article, so you won't have to re‐enter its bibliographic information, and can upload your files directly: http://datadryad.org/submit?journalID=pgenetics&manu=PGENETICS-D-19-01917R2 More information about depositing data in Dryad is available at http://www.datadryad.org/depositing. If you experience any difficulties in submitting your data, please contact help@datadryad.org for support. Additionally, please be aware that our data availability policy requires that all numerical data underlying display items are included with the submission, and you will need to provide this before we can formally accept your manuscript, if not already present. ---------------------------------------------------- Press Queries If you or your institution will be preparing press materials for this manuscript, or if you need to know your paper's publication date for media purposes, please inform the journal staff as soon as possible so that your submission can be scheduled accordingly. Your manuscript will remain under a strict press embargo until the publication date and time. This means an early version of your manuscript will not be published ahead of your final version. PLOS Genetics may also choose to issue a press release for your article. If there's anything the journal should know or you'd like more information, please get in touch via plosgenetics@plos.org. |
| Formally Accepted |
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PGENETICS-D-19-01917R2 Tryptamine accumulation caused by deletion of MrMao-1 in Metarhizium genome significantly enhances insecticidal virulence Dear Dr Kang, We are pleased to inform you that your manuscript entitled "Tryptamine accumulation caused by deletion of MrMao-1 in Metarhizium genome significantly enhances insecticidal virulence " has been formally accepted for publication in PLOS Genetics! Your manuscript is now with our production department and you will be notified of the publication date in due course. The corresponding author will soon be receiving a typeset proof for review, to ensure errors have not been introduced during production. Please review the PDF proof of your manuscript carefully, as this is the last chance to correct any errors. Please note that major changes, or those which affect the scientific understanding of the work, will likely cause delays to the publication date of your manuscript. Soon after your final files are uploaded, unless you have opted out or your manuscript is a front-matter piece, the early version of your manuscript will be published online. The date of the early version will be your article's publication date. The final article will be published to the same URL, and all versions of the paper will be accessible to readers. Thank you again for supporting PLOS Genetics and open-access publishing. We are looking forward to publishing your work! With kind regards, Jason Norris PLOS Genetics On behalf of: The PLOS Genetics Team Carlyle House, Carlyle Road, Cambridge CB4 3DN | United Kingdom plosgenetics@plos.org | +44 (0) 1223-442823 plosgenetics.org | Twitter: @PLOSGenetics |
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