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Table 1.

Data compiled from published GWA studies of autoimmune diseases (ADs).

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Table 2.

Association results in novel pleiotropic regions associated with SLE.

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Table 3.

Shared loci: Association results for SLE susceptibility loci associated with another autoimmune disease.

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Table 4.

SLE–specific loci: Association results for established SLE–specific regions in our joint cohorts.

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Figure 1.

Shared loci between GWAS of ADs.

Gene regions are below each chromosome, diseases where it was reported are above, represented by a colored circle.

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Figure 2.

Hierarchical clustering of ADs and four non-ADs.

Analysis was restricted to diseases with >10 reported loci in their GWA studies, to associations reported from populations of European ancestry, and excluded those reported from the aggregate phenotype of IBD, as well as those with MS severity or age of onset. Dendrogram and heatmap are shown.

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