Transcriptomic comparison of two selective retinal cell ablation paradigms in zebrafish reveals shared and cell-specific regenerative responses

• Kevin Emmerich ,

  Contributed equally to this work with: Kevin Emmerich, Steven L. Walker, Guohua Wang

  Roles Data curation, Formal analysis, Investigation, Validation, Visualization, Writing – original draft, Writing – review & editing

  Affiliations Department of Ophthalmology, Wilmer Eye Institute, Johns Hopkins University, Baltimore, Maryland, United States of America, McKusick-Nathans Institute of the Department of Genetic Medicine, Johns Hopkins School of Medicine, Baltimore, Maryland, United States of America

  https://orcid.org/0000-0002-0088-1333

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• Steven L. Walker ,

  Contributed equally to this work with: Kevin Emmerich, Steven L. Walker, Guohua Wang

  Roles Conceptualization, Data curation, Formal analysis, Investigation, Methodology, Validation, Visualization, Writing – original draft

  Current address: School of Biomedical Sciences, The Chinese University of Hong Kong, N.T., Hong Kong

  Affiliation Department of Cellular Biology and Anatomy, Medical College of Georgia, Augusta University, Augusta, Georgia, United States of America

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• Guohua Wang ,

  Contributed equally to this work with: Kevin Emmerich, Steven L. Walker, Guohua Wang

  Roles Formal analysis, Investigation

  Current address: School of Computer Science and Technology, Harbin Institute of Technology, Harbin, People’s Republic of China

  Affiliation Department of Ophthalmology, Wilmer Eye Institute, Johns Hopkins University, Baltimore, Maryland, United States of America

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• David T. White,

  Roles Data curation, Investigation, Methodology, Validation, Visualization

  Affiliation Department of Ophthalmology, Wilmer Eye Institute, Johns Hopkins University, Baltimore, Maryland, United States of America

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• Anneliese Ceisel,

  Roles Data curation, Investigation, Validation, Writing – review & editing

  Affiliation Department of Ophthalmology, Wilmer Eye Institute, Johns Hopkins University, Baltimore, Maryland, United States of America

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• Fang Wang,

  Roles Formal analysis, Investigation

  Affiliation Department of Ophthalmology, Wilmer Eye Institute, Johns Hopkins University, Baltimore, Maryland, United States of America

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• Yong Teng,

  Roles Data curation, Formal analysis, Investigation, Methodology, Validation

  Affiliation Department of Hematology and Medical Oncology, Winship Cancer Institute, Emory University, Atlanta, Georgia, United States of America

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• Zeeshaan Chunawala,

  Roles Formal analysis, Investigation, Writing – review & editing

  Affiliation Department of Ophthalmology, Wilmer Eye Institute, Johns Hopkins University, Baltimore, Maryland, United States of America

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• Gianna Graziano,

  Roles Formal analysis, Investigation

  Affiliation Department of Ophthalmology, Wilmer Eye Institute, Johns Hopkins University, Baltimore, Maryland, United States of America

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• Saumya Nimmagadda,

  Roles Formal analysis, Investigation, Writing – review & editing

  Affiliation Department of Ophthalmology, Wilmer Eye Institute, Johns Hopkins University, Baltimore, Maryland, United States of America

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• Meera T. Saxena,

  Roles Formal analysis, Investigation, Writing – review & editing

  Affiliation Department of Ophthalmology, Wilmer Eye Institute, Johns Hopkins University, Baltimore, Maryland, United States of America

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• Jiang Qian,

  Roles Formal analysis, Investigation, Supervision

  Affiliation Department of Ophthalmology, Wilmer Eye Institute, Johns Hopkins University, Baltimore, Maryland, United States of America

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• Jeff S. Mumm

  Roles Conceptualization, Formal analysis, Funding acquisition, Investigation, Methodology, Project administration, Resources, Supervision, Visualization, Writing – original draft, Writing – review & editing

  * E-mail: jmumm3@jhmi.edu

  Affiliations Department of Ophthalmology, Wilmer Eye Institute, Johns Hopkins University, Baltimore, Maryland, United States of America, McKusick-Nathans Institute of the Department of Genetic Medicine, Johns Hopkins School of Medicine, Baltimore, Maryland, United States of America, Department of Cellular Biology and Anatomy, Medical College of Georgia, Augusta University, Augusta, Georgia, United States of America, Solomon H. Snyder Department of Neuroscience, Johns Hopkins University, Baltimore, Maryland, United States of America

  https://orcid.org/0000-0002-2575-287X

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