Mapping genetic effects on cell type-specific chromatin accessibility and annotating complex immune trait variants using single nucleus ATAC-seq in peripheral blood

• Paola Benaglio ,

  Contributed equally to this work with: Paola Benaglio, Jacklyn Newsome

  Roles Formal analysis, Investigation, Methodology, Writing – original draft, Writing – review & editing

  Affiliation Department of Pediatrics, University of California San Diego, San Diego, California, United States of America

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• Jacklyn Newsome ,

  Contributed equally to this work with: Paola Benaglio, Jacklyn Newsome

  Roles Formal analysis, Investigation, Methodology, Writing – original draft, Writing – review & editing

  Affiliation Bioinformatics and Systems Biology Program, University of California San Diego, San Diego, California, United States of America

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• Jee Yun Han,

  Roles Methodology

  Affiliation Center for Epigenomics, Department of Cellular and Molecular Medicine, University of California San Diego, San Diego, California, United States of America

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• Joshua Chiou,

  Roles Formal analysis

  Affiliation Biomedical Sciences Graduate Program. University of California San Diego, San Diego, California, United States of America

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• Anthony Aylward,

  Roles Formal analysis

  Affiliation Bioinformatics and Systems Biology Program, University of California San Diego, San Diego, California, United States of America

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• Sierra Corban,

  Roles Methodology

  Affiliation Department of Pediatrics, University of California San Diego, San Diego, California, United States of America

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• Michael Miller,

  Roles Methodology

  Affiliation Center for Epigenomics, Department of Cellular and Molecular Medicine, University of California San Diego, San Diego, California, United States of America

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• Mei-Lin Okino,

  Roles Methodology

  Affiliation Department of Pediatrics, University of California San Diego, San Diego, California, United States of America

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• Jaspreet Kaur,

  Roles Methodology

  Affiliation Department of Pediatrics, University of California San Diego, San Diego, California, United States of America

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• Sebastian Preissl,

  Roles Formal analysis, Investigation, Supervision, Writing – review & editing

  Affiliation Center for Epigenomics, Department of Cellular and Molecular Medicine, University of California San Diego, San Diego, California, United States of America

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• David U. Gorkin,

  Roles Formal analysis, Investigation, Supervision, Writing – review & editing

  Affiliation Center for Epigenomics, Department of Cellular and Molecular Medicine, University of California San Diego, San Diego, California, United States of America

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• Kyle J. Gaulton

  Roles Conceptualization, Formal analysis, Funding acquisition, Supervision, Writing – original draft, Writing – review & editing

  * E-mail: kgaulton@ucsd.edu

  Affiliation Department of Pediatrics, University of California San Diego, San Diego, California, United States of America

  https://orcid.org/0000-0003-1318-7161

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