Exploring the genetic diversity of the Japanese population: Insights from a large-scale whole genome sequencing analysis

• Yosuke Kawai ,

  Roles Conceptualization, Formal analysis, Methodology, Writing – original draft, Writing – review & editing

  * E-mail: ykawai@ri.ncgm.go.jp (YK); katokunaga@ri.ncgm.go.jp (KT)

  Affiliation Genome Medical Science Project, Research Institute, National Center for Global Health and Medicine, Shinjuku-ku, Tokyo, Japan

  https://orcid.org/0000-0003-0666-1224

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• Yusuke Watanabe,

  Roles Formal analysis, Writing – original draft

  Current address: Department of Biological Sciences, Graduate School of Science, The University of Tokyo, Bunkyo-ku, Tokyo, Japan

  Affiliation Genome Medical Science Project, Research Institute, National Center for Global Health and Medicine, Shinjuku-ku, Tokyo, Japan

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• Yosuke Omae,

  Roles Investigation, Methodology, Writing – original draft

  Affiliations Genome Medical Science Project, Research Institute, National Center for Global Health and Medicine, Shinjuku-ku, Tokyo, Japan, Central Biobank, National Center Biobank Network, Shinjuku-ku, Tokyo, Japan

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• Reiko Miyahara,

  Roles Methodology

  Current address: Center for Surveillance, Immunization and Epidemiologic Research, National Institute of Infectious Diseases, Shinjuku-ku, Tokyo, Japan

  Affiliation Central Biobank, National Center Biobank Network, Shinjuku-ku, Tokyo, Japan

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• Seik-Soon Khor,

  Roles Formal analysis, Writing – original draft

  Current address: Singapore Centre for Environmental Life Sciences Engineering, Nanyang Technological University, Singapore, Singapore

  Affiliation Genome Medical Science Project, Research Institute, National Center for Global Health and Medicine, Shinjuku-ku, Tokyo, Japan

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• Eisei Noiri,

  Roles Conceptualization, Methodology

  Affiliation Central Biobank, National Center Biobank Network, Shinjuku-ku, Tokyo, Japan

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• Koji Kitajima,

  Roles Data curation

  Affiliations Central Biobank, National Center Biobank Network, Shinjuku-ku, Tokyo, Japan, Department of Data Science Center for Clinical Sciences, National Center for Global Health and Medicine, Shinjuku-ku, Tokyo, Japan

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• Hideyuki Shimanuki,

  Roles Data curation

  Affiliations Central Biobank, National Center Biobank Network, Shinjuku-ku, Tokyo, Japan, Department of Data Science Center for Clinical Sciences, National Center for Global Health and Medicine, Shinjuku-ku, Tokyo, Japan

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• Hiroyuki Gatanaga,

  Roles Resources

  Affiliation AIDS Clinical Center, National Center for Global Health and Medicine, Shinjuku-ku, Tokyo, Japan

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• Kenichiro Hata,

  Roles Resources

  Affiliation Department of Maternal-Fetal Biology, National Center for Child Health and Development, Setagaya-ku, Tokyo, Japan

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• Kotaro Hattori,

  Roles Resources

  Affiliation Department of Bioresources, Medical Genome Center, National Center of Neurology and Psychiatry, Kodaira, Tokyo, Japan

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• Aritoshi Iida,

  Roles Resources

  Affiliation Department of Clinical Genome Analysis, Medical Genome Center, National Center of Neurology and Psychiatry, Kodaira, Tokyo, Japan

  https://orcid.org/0000-0001-7538-1651

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• Hatsue Ishibashi-Ueda,

  Roles Resources

  Affiliation NCVC Biobank, National Cerebral and Cardiovascular Center, Suita, Osaka, Japan

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• Tadashi Kaname,

  Roles Resources

  Affiliation Department of Genome Medicine, National Center for Child Health and Development, Setagaya-ku, Tokyo, Japan

  https://orcid.org/0000-0003-0281-9610

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• Tatsuya Kanto,

  Roles Resources

  Affiliation Department of Liver Disease, Research Center for Hepatitis and Immunology, National Center for Global Health and Medicine, Ichikawa, Chiba, Japan

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• Ryo Matsumura,

  Roles Resources

  Affiliation Department of Bioresources, Medical Genome Center, National Center of Neurology and Psychiatry, Kodaira, Tokyo, Japan

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• Kengo Miyo,

  Roles Data curation

  Affiliation Center for Medical Informatics Intelligence, National Center for Global Health and Medicine, Shinjuku-ku, Tokyo, Japan

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• Michio Noguchi,

  Roles Resources

  Affiliation NCVC Biobank, National Cerebral and Cardiovascular Center, Suita, Osaka, Japan

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• Kouichi Ozaki,

  Roles Resources

  Affiliations Medical Genome Center, Research Institute, National Center for Geriatrics and Gerontology, Obu, Aichi, Japan, RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa, Japan

  https://orcid.org/0000-0003-0028-1570

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• Masaya Sugiyama,

  Roles Investigation, Resources

  Affiliation Department of Viral Pathogenesis and Controls, Research Institute, National Center for Global Health and Medicine, Shinjuku-ku, Tokyo, Japan

  https://orcid.org/0000-0002-9084-7197

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• Ayako Takahashi,

  Roles Resources

  Affiliation NCVC Biobank, National Cerebral and Cardiovascular Center, Suita, Osaka, Japan

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• Haruhiko Tokuda,

  Roles Resources

  Affiliations Core Facility Administration, Research Institute, National Center for Geriatrics and Gerontology, Obu, Aichi, Japan, Department of Metabolic Research, Research Institute, National Center for Geriatrics and Gerontology, Obu, Aichi, Japan, Department of Clinical Laboratory, Hospital, National Center for Geriatrics and Gerontology, Obu, Aichi, Japan

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• Tsutomu Tomita,

  Roles Resources

  Affiliation NCVC Biobank, National Cerebral and Cardiovascular Center, Suita, Osaka, Japan

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• Akihiro Umezawa,

  Roles Resources

  Affiliation Center for Regenerative Medicine, Research Institute, National Center for Child Health and Development, Setagaya-ku, Tokyo, Japan

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• Hiroshi Watanabe,

  Roles Resources

  Affiliations Core Facility Administration, Research Institute, National Center for Geriatrics and Gerontology, Obu, Aichi, Japan, Innovation Center for Translational Research, Hospital, National Center for Geriatrics and Gerontology, Obu, Aichi, Japan

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• Sumiko Yoshida,

  Roles Resources

  Affiliation Department of Bioresources, Medical Genome Center, National Center of Neurology and Psychiatry, Kodaira, Tokyo, Japan

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• Yu-ichi Goto,

  Roles Project administration, Resources

  Affiliation Medical Genome Center, National Center of Neurology and Psychiatry, Kodaira, Tokyo, Japan

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• Yutaka Maruoka,

  Roles Project administration, Resources

  Affiliation Department of Oral and Maxillofacial Surgery, National Center for Global Health and Medicine, Shinjuku-ku, Tokyo, Japan

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• Yoichi Matsubara,

  Roles Project administration, Resources

  Affiliation National Center for Child Health and Development, Setagaya-ku, Tokyo, Japan

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• Shumpei Niida,

  Roles Project administration, Resources

  Affiliation Core Facility Administration, Research Institute, National Center for Geriatrics and Gerontology, Obu, Aichi, Japan

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• Masashi Mizokami,

  Roles Conceptualization

  Affiliation Genome Medical Science Project, Research Institute, National Center for Global Health and Medicine, Ichikawa, Chiba, Japan

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•  [ ... ],
• Katsushi Tokunaga

  Roles Conceptualization, Supervision, Writing – review & editing

  * E-mail: ykawai@ri.ncgm.go.jp (YK); katokunaga@ri.ncgm.go.jp (KT)

  Affiliations Genome Medical Science Project, Research Institute, National Center for Global Health and Medicine, Shinjuku-ku, Tokyo, Japan, Central Biobank, National Center Biobank Network, Shinjuku-ku, Tokyo, Japan

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