Domestication and selection footprints in Persian walnuts (Juglans regia)

• Xiang Luo ,

  Contributed equally to this work with: Xiang Luo, Huijuan Zhou, Da Cao

  Roles Conceptualization, Data curation, Funding acquisition, Investigation, Methodology, Writing – review & editing

  Affiliations College of Agriculture, Henan University, Kaifeng, Henan, China, Key Laboratory of Resource Biology and Biotechnology in Western China, Ministry of Education, College of Life Sciences, Northwest University, Xi’an, Shaanxi, China, Zhengzhou Fruit Research Institute, Chinese Academy of Agricultural Sciences, Zhengzhou, China

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• Huijuan Zhou ,

  Contributed equally to this work with: Xiang Luo, Huijuan Zhou, Da Cao

  Roles Data curation, Formal analysis, Investigation

  Affiliations Key Laboratory of Resource Biology and Biotechnology in Western China, Ministry of Education, College of Life Sciences, Northwest University, Xi’an, Shaanxi, China, Xi’an Botanical Garden of Shaanxi Province, Xi’an, China, College of Forestry, Northwest A&F University, Yangling, Shaanxi, China

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• Da Cao ,

  Contributed equally to this work with: Xiang Luo, Huijuan Zhou, Da Cao

  Roles Data curation

  Affiliations Zhengzhou Fruit Research Institute, Chinese Academy of Agricultural Sciences, Zhengzhou, China, Laboratory of Functional Plant Biology, Department of Biology, Ghent University, Ghent, Belgium

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• Feng Yan,

  Roles Formal analysis

  Affiliation Key Laboratory of Resource Biology and Biotechnology in Western China, Ministry of Education, College of Life Sciences, Northwest University, Xi’an, Shaanxi, China

  ⨯
• Pengpeng Chen,

  Roles Formal analysis

  Affiliation Key Laboratory of Resource Biology and Biotechnology in Western China, Ministry of Education, College of Life Sciences, Northwest University, Xi’an, Shaanxi, China

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• Jiangtao Wang,

  Roles Formal analysis

  Affiliation Key Laboratory of Resource Biology and Biotechnology in Western China, Ministry of Education, College of Life Sciences, Northwest University, Xi’an, Shaanxi, China

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• Keith Woeste,

  Roles Methodology, Writing – review & editing

  Affiliation USDA Forest Service Hardwood Tree Improvement and Regeneration Center (HTIRC), Department of Forestry and Natural Resources, Purdue University, West Lafayette, Indiana, United States of America

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• Xin Chen,

  Roles Data curation

  Affiliation Shandong Institute of Pomology, National Germplasm Repository of Walnut and Chestnut, Tai’an, China

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• Zhangjun Fei,

  Roles Writing – review & editing

  Affiliation Boyce Thompson Institute for Plant Research, US Department of Agriculture (USDA) Robert W. Holley Center for Agriculture and Health, Cornell University, Ithaca, New York, United States of America

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• Hong An,

  Roles Writing – review & editing

  Affiliation Bioinformatics and Analytics Core, University of Missouri, Columbia, Missouri, United States of America

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• Maria Malvolti,

  Roles Data curation

  Affiliation Research Institute on Terrestrial Ecosystems, National Research Council, Porano, Terni, Italy

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• Kai Ma,

  Roles Writing – review & editing

  Affiliation Xinjiang Academy of Agricultural Sciences, Urumqi, China

  ⨯
• Chaobin Liu,

  Roles Data curation

  Affiliation Laboratory of Functional Plant Biology, Department of Biology, Ghent University, Ghent, Belgium

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• Aziz Ebrahimi,

  Roles Data curation

  Affiliation USDA Forest Service Hardwood Tree Improvement and Regeneration Center (HTIRC), Department of Forestry and Natural Resources, Purdue University, West Lafayette, Indiana, United States of America

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• Chengkui Qiao,

  Roles Data curation

  Affiliation Zhengzhou Fruit Research Institute, Chinese Academy of Agricultural Sciences, Zhengzhou, China

  ⨯
• Hang Ye,

  Roles Data curation, Formal analysis

  Affiliation Key Laboratory of Resource Biology and Biotechnology in Western China, Ministry of Education, College of Life Sciences, Northwest University, Xi’an, Shaanxi, China

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• Mengdi Li,

  Roles Formal analysis

  Affiliation Key Laboratory of Resource Biology and Biotechnology in Western China, Ministry of Education, College of Life Sciences, Northwest University, Xi’an, Shaanxi, China

  ⨯
• Zhenhua Lu,

  Roles Investigation

  Affiliation Zhengzhou Fruit Research Institute, Chinese Academy of Agricultural Sciences, Zhengzhou, China

  https://orcid.org/0000-0003-1711-0495

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• Jiabao Xu ,

  Roles Formal analysis

  * E-mail: jiabao.xu@bgi.com (JX); s.y.cao@163.com (SC); pengzhao@nwu.edu.cn (PZ)

  Affiliation BGI Genomics, BGI-Shenzhen, Shenzhen, China

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• Shangying Cao ,

  Roles Investigation, Writing – review & editing

  * E-mail: jiabao.xu@bgi.com (JX); s.y.cao@163.com (SC); pengzhao@nwu.edu.cn (PZ)

  Affiliation Zhengzhou Fruit Research Institute, Chinese Academy of Agricultural Sciences, Zhengzhou, China

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•  [ ... ],
• Peng Zhao

  Roles Conceptualization, Data curation, Formal analysis, Funding acquisition, Investigation, Methodology, Project administration, Resources, Supervision, Visualization, Writing – original draft, Writing – review & editing

  * E-mail: jiabao.xu@bgi.com (JX); s.y.cao@163.com (SC); pengzhao@nwu.edu.cn (PZ)

  Affiliation Key Laboratory of Resource Biology and Biotechnology in Western China, Ministry of Education, College of Life Sciences, Northwest University, Xi’an, Shaanxi, China

  https://orcid.org/0000-0003-3033-6982

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