Evolution of Salmonella enterica serotype Typhimurium driven by anthropogenic selection and niche adaptation

• Matt Bawn,

  Roles Conceptualization, Formal analysis, Writing – original draft

  Affiliations Quadram Institute Biosciences, Norwich Research Park, Norwich, United Kingdom, Earlham Institute, Norwich Research Park, Norwich, United Kingdom

  http://orcid.org/0000-0001-7245-4034

  ⨯
• Nabil-Fareed Alikhan,

  Roles Formal analysis, Investigation, Visualization, Writing – review & editing

  Affiliation Quadram Institute Biosciences, Norwich Research Park, Norwich, United Kingdom

  http://orcid.org/0000-0002-1243-0767

  ⨯
• Gaëtan Thilliez,

  Roles Formal analysis, Writing – review & editing

  Affiliation Quadram Institute Biosciences, Norwich Research Park, Norwich, United Kingdom

  http://orcid.org/0000-0001-8650-4477

  ⨯
• Mark Kirkwood,

  Roles Formal analysis, Writing – review & editing

  Affiliation Quadram Institute Biosciences, Norwich Research Park, Norwich, United Kingdom

  http://orcid.org/0000-0003-3669-0595

  ⨯
• Nicole E. Wheeler,

  Roles Formal analysis, Writing – review & editing

  Affiliation Centre for Genomic Pathogen Surveillance, Wellcome Sanger Institute, Cambridge, United Kingdom

  http://orcid.org/0000-0003-4599-9164

  ⨯
• Liljana Petrovska,

  Roles Resources, Writing – review & editing

  Affiliation Animal and Plant Health Agency, Addlestone, United Kingdom

  ⨯
• Timothy J. Dallman,

  Roles Methodology, Resources, Writing – review & editing

  Affiliation Gastrointestinal Bacteria Reference Unit, National Infection Service, Public Health England, London, United Kingdom

  ⨯
• Evelien M. Adriaenssens,

  Roles Formal analysis, Writing – original draft, Writing – review & editing

  Affiliation Quadram Institute Biosciences, Norwich Research Park, Norwich, United Kingdom

  http://orcid.org/0000-0003-4826-5406

  ⨯
• Neil Hall,

  Roles Funding acquisition, Resources, Supervision, Writing – review & editing

  Affiliation Earlham Institute, Norwich Research Park, Norwich, United Kingdom

  http://orcid.org/0000-0003-2808-0009

  ⨯
• Robert A. Kingsley

  Roles Conceptualization, Formal analysis, Funding acquisition, Resources, Supervision, Writing – original draft, Writing – review & editing

  * E-mail: Rob.Kingsley@quadram.ac.uk

  Affiliations Quadram Institute Biosciences, Norwich Research Park, Norwich, United Kingdom, University of East Anglia, Norwich, United Kingdom

  http://orcid.org/0000-0002-0194-6485

  ⨯