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Open Access
Peer-reviewed
Research Article
Amino acid signatures of HLA Class-I and II molecules are strongly associated with SLE susceptibility and autoantibody production in Eastern Asians
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Julio E. Molineros ,
Contributed equally to this work with: Julio E. Molineros, Loren L. Looger, Kwangwoo Kim
Roles Data curation, Formal analysis, Investigation, Methodology, Software, Validation, Visualization, Writing – original draft, Writing – review & editing
Affiliation Arthritis and Clinical Immunology Research Program, Oklahoma Medical Research Foundation, Oklahoma City, Oklahoma, United States of America
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Loren L. Looger ,
Contributed equally to this work with: Julio E. Molineros, Loren L. Looger, Kwangwoo Kim
Roles Formal analysis, Investigation, Methodology, Visualization, Writing – original draft, Writing – review & editing
Affiliation Howard Hughes Medical Institute, Janelia Research Campus, Ashburn, Virginia, United States of America
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Kwangwoo Kim ,
Contributed equally to this work with: Julio E. Molineros, Loren L. Looger, Kwangwoo Kim
Roles Data curation, Formal analysis, Investigation, Methodology, Software, Validation, Visualization, Writing – original draft, Writing – review & editing
Affiliation Department of Biology, Kyung Hee University, Seoul, Republic of Korea
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Yukinori Okada,
Roles Data curation, Formal analysis, Investigation, Software, Validation
Affiliations Department of Statistical Genetics, Osaka University Graduate School of Medicine, Osaka, Japan, Laboratory for Statistical Analysis, RIKEN Center for Integrative Medical Sciences, Yokohama, Japan, Laboratory of Statistical Immunology, Immunology Frontier Research Center (WPI-IFReC), Osaka University, Suita, Japan
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Chikashi Terao,
Roles Data curation, Formal analysis, Investigation, Validation
Affiliations Center for Genomic Medicine, Kyoto University Graduate School of Medicine, Kyoto, Japan, Center for the Promotion of Interdisciplinary Education and Research, Kyoto University, Kyoto, Japan, Division of Genetics, Brigham and Women’s Hospital, Harvard Medical School, Boston, Massachusetts, United States of America, Program in Medical and Population Genetics, Broad Institute, Cambridge, Massachusetts, United States of America
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Celi Sun,
Roles Data curation, Formal analysis
Affiliation Arthritis and Clinical Immunology Research Program, Oklahoma Medical Research Foundation, Oklahoma City, Oklahoma, United States of America
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Xu-jie Zhou,
Roles Data curation
Affiliations Renal Division, Peking University First Hospital, Peking University Institute of Nephrology, Key Laboratory of Renal Disease, Ministry of Health of China, Beijing, China, Key Laboratory of Chronic Kidney Disease Prevention and Treatment (Peking University), Ministry of Education, Beijing, China
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Prithvi Raj,
Roles Data curation, Resources
Affiliation Department of Immunology, University of Texas Southwestern Medical Center, Dallas, Texas, United States of America
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Yuta Kochi,
Roles Resources
Affiliation Laboratory for Autoimmune Diseases, Center for Integrative Medical Sciences, RIKEN, Yokohama, Japan
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Akari Suzuki,
Roles Resources
Affiliation Laboratory for Autoimmune Diseases, Center for Integrative Medical Sciences, RIKEN, Yokohama, Japan
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Shuji Akizuki,
Roles Resources
Affiliation Department of Rheumatology and Clinical Immunology, Graduate School of Medicine, Kyoto University, Kyoto, Japan
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Shuichiro Nakabo,
Roles Resources
Affiliation Department of Rheumatology and Clinical Immunology, Graduate School of Medicine, Kyoto University, Kyoto, Japan
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So-Young Bang,
Roles Resources
Affiliation Department of Rheumatology, Hanyang University Hospital for Rheumatic Diseases, Seoul, Korea
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Hye-Soon Lee,
Roles Resources
Affiliation Department of Rheumatology, Hanyang University Hospital for Rheumatic Diseases, Seoul, Korea
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Young Mo Kang,
Roles Resources
Affiliation School of Medicine, Kyungpook National University Hospital, Daegu, Korea
⨯ - Chang-Hee Suh,
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Won Tae Chung,
Roles Resources
Affiliation Dong-A University Hospital, Department of Internal Medicine, Busan, Korea
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Yong-Beom Park,
Roles Resources
Affiliation Department of Internal Medicine, Yonsei University College of Medicine, Seoul, Korea
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Jung-Yoon Choe,
Roles Resources
Affiliation Department of Rheumatology, Catholic University of Daegu School of Medicine, Daegu, Korea
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Seung-Cheol Shim,
Roles Resources
Affiliation Daejeon Rheumatoid & Degenerative Arthritis Center, Chungnam National University Hospital, Daejeon, Korea
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Shin-Seok Lee,
Roles Resources
Affiliation Department of Rheumatology, Chonnam National University Medical School and Hospital, Gwangju, Korea
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Xiaoxia Zuo,
Roles Resources
Affiliation Department of Rheumatology and Immunology, Xiangya Hospital, Central South University, Changsha, China
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Kazuhiko Yamamoto,
Roles Resources
Affiliation Laboratory for Autoimmune Diseases, Center for Integrative Medical Sciences, RIKEN, Yokohama, Japan
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Quan-Zhen Li,
Roles Resources
Affiliation Department of Immunology and Internal Medicine, University of Texas Southwestern Medical Center, Dallas, Texas, United States of America
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Nan Shen,
Roles Resources
Affiliations Department of Rheumatology and Shanghai Institute of Rheumatology, Renji Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China, Institute of Health Sciences, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences and Shanghai Jiao Tong University School of Medicine, Shanghai, China, Center for Autoimmune Genomics and Etiology, Cincinnati Children’s Hospital Medical Center, Cincinnati, Ohio, United States of America, Department of Pediatrics, University of Cincinnati College of Medicine, Cincinnati, Ohio, United States of America
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Lauren L. Porter,
Roles Resources, Visualization
Affiliation Howard Hughes Medical Institute, Janelia Research Campus, Ashburn, Virginia, United States of America
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John B. Harley,
Roles Resources, Writing – review & editing
Affiliations Center for Autoimmune Genomics and Etiology, Cincinnati Children’s Hospital Medical Center, Cincinnati, Ohio, United States of America, Department of Pediatrics, University of Cincinnati College of Medicine, Cincinnati, Ohio, United States of America, US Department of Veterans Affairs Medical Center, Cincinnati, Ohio, United States of America
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Kek Heng Chua,
Roles Resources
Affiliation Department of Biomedical Science, Faculty of Medicine, University of Malaya, Kuala Lumpur, Malaysia
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Hong Zhang,
Roles Resources
Affiliations Renal Division, Peking University First Hospital, Peking University Institute of Nephrology, Key Laboratory of Renal Disease, Ministry of Health of China, Beijing, China, Key Laboratory of Chronic Kidney Disease Prevention and Treatment (Peking University), Ministry of Education, Beijing, China
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Edward K. Wakeland,
Roles Resources
Affiliation Department of Immunology, University of Texas Southwestern Medical Center, Dallas, Texas, United States of America
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Betty P. Tsao,
Roles Resources
Affiliation Division of Rheumatology and Immunology, Department of Medicine, Medical University of South Carolina, Charleston, South Carolina, United States of America
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Sang-Cheol Bae ,
Roles Conceptualization, Resources, Writing – review & editing
* E-mail: scbae@hanyang.ac.kr (SCB); naths@omrf.org (SKN)
Affiliation Department of Rheumatology, Hanyang University Hospital for Rheumatic Diseases, Seoul, Korea
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Swapan K. Nath
Roles Conceptualization, Funding acquisition, Methodology, Project administration, Resources, Supervision, Writing – original draft, Writing – review & editing
* E-mail: scbae@hanyang.ac.kr (SCB); naths@omrf.org (SKN)
Affiliation Arthritis and Clinical Immunology Research Program, Oklahoma Medical Research Foundation, Oklahoma City, Oklahoma, United States of America
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Amino acid signatures of HLA Class-I and II molecules are strongly associated with SLE susceptibility and autoantibody production in Eastern Asians
- Julio E. Molineros,
- Loren L. Looger,
- Kwangwoo Kim,
- Yukinori Okada,
- Chikashi Terao,
- Celi Sun,
- Xu-jie Zhou,
- Prithvi Raj,
- Yuta Kochi,
- Akari Suzuki
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- Published: April 25, 2019
- https://doi.org/10.1371/journal.pgen.1008092