Genetic effects on the commensal microbiota in inflammatory bowel disease patients

• Hugues Aschard ,

  Roles Conceptualization, Formal analysis, Investigation, Methodology, Visualization, Writing – original draft, Writing – review & editing

  * E-mail: hugues.aschard@pasteur.fr (HA); david.skurnik@inserm.fr (DS); harry.sokol@aphp.fr (HS)

  Affiliations Centre de Bioinformatique, Biostatistique et Biologie Intégrative (C3BI), Institut Pasteur, Paris, France, Department of Epidemiology, Harvard T.H. Chan School of Public Health, Boston, Massachusetts, United States of America

  http://orcid.org/0000-0002-7554-6783

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• Vincent Laville,

  Roles Formal analysis, Methodology, Writing – review & editing

  Affiliation Centre de Bioinformatique, Biostatistique et Biologie Intégrative (C3BI), Institut Pasteur, Paris, France

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• Eric Tchetgen Tchetgen,

  Roles Methodology

  Affiliation Department of Statistics, The Wharton School at the University of Pennsylvania, Philadelphia, Pennsylvania, United States of America

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• Dan Knights,

  Roles Data curation, Validation, Writing – review & editing

  Affiliations Department of Computer Science and Engineering, University of Minnesota, Minneapolis, Minnesota, United States of America, Broad Institute of Harvard and MIT, Cambridge, Massachusetts, United States of America, Center for Computational and Integrative Biology, Massachusetts General Hospital and Harvard Medical School, Boston, MA, United States of America, Biotechnology Institute, University of Minnesota, St. Paul, Minnesota, United States of America

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• Floris Imhann,

  Roles Data curation, Validation, Writing – review & editing

  Affiliation Department of Gastroenterology and Hepatology, University of Groningen and University Medical Center Groningen, Groningen, the Netherlands

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• Philippe Seksik,

  Roles Investigation, Writing – review & editing

  Affiliation Department of Gastroenterology, Saint Antoine Hospital, Paris, France

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• Noah Zaitlen,

  Roles Conceptualization, Methodology, Writing – review & editing

  Affiliation Department of Medicine, University of California, San Francisco, California, United States of America

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• Mark S. Silverberg,

  Roles Data curation, Investigation, Writing – review & editing

  Affiliation Zane Cohen Centre for Digestive Diseases, Mount Sinai Hospital, Toronto, Ontario, Canada

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• Jacques Cosnes,

  Roles Investigation, Writing – review & editing

  Affiliations Department of Gastroenterology, Saint Antoine Hospital, Paris, France, Sorbonne Université, Paris, France

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• Rinse K. Weersma,

  Roles Validation, Writing – review & editing

  Affiliation Department of Gastroenterology and Hepatology, University of Groningen and University Medical Center Groningen, Groningen, the Netherlands

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• Ramnik Xavier,

  Roles Investigation, Writing – review & editing

  Affiliations Broad Institute of Harvard and MIT, Cambridge, Massachusetts, United States of America, Center for Computational and Integrative Biology, Massachusetts General Hospital and Harvard Medical School, Boston, MA, United States of America, Division of Gastroenterology, Massachusetts General Hospital and Harvard Medical School, Boston, Massachusetts, United States of America

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• Laurent Beaugerie,

  Roles Investigation, Writing – review & editing

  Affiliations Department of Gastroenterology, Saint Antoine Hospital, Paris, France, Sorbonne Université, Paris, France

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• David Skurnik ,

  Roles Conceptualization, Supervision, Writing – original draft

  * E-mail: hugues.aschard@pasteur.fr (HA); david.skurnik@inserm.fr (DS); harry.sokol@aphp.fr (HS)

  Affiliations Division of Infectious Diseases, Harvard Medical School, Boston, Massachusetts, United States of America, Massachusetts Technology and Analytics, Brookline, Massachusetts, United States of America, Department of Microbiology, Necker Hospital and University Paris Descartes, Paris, France, INSERM U1151-Equipe 11, Institut Necker-Enfants Malades, Paris, France

  http://orcid.org/0000-0002-4205-9639

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• Harry Sokol

  Roles Conceptualization, Investigation, Supervision, Writing – original draft

  * E-mail: hugues.aschard@pasteur.fr (HA); david.skurnik@inserm.fr (DS); harry.sokol@aphp.fr (HS)

  Affiliations Department of Gastroenterology, Saint Antoine Hospital, Paris, France, Sorbonne Université, Paris, France, Micalis Institute, AgroParisTech, Jouy-en-Josas, France, INSERM CRSA UMRS U938, Paris, France

  http://orcid.org/0000-0002-2914-1822

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