Replicative and non-replicative mechanisms in the formation of clustered CNVs are indicated by whole genome characterization

• Lusine Nazaryan-Petersen ,

  Contributed equally to this work with: Lusine Nazaryan-Petersen, Jesper Eisfeldt, Zeynep Tümer, Anna Lindstrand

  Roles Formal analysis, Investigation, Supervision, Validation, Visualization, Writing – original draft, Writing – review & editing

  Affiliation Wilhelm Johannsen Center for Functional Genome Research, Institute of Cellular and Molecular Medicine, University of Copenhagen, Copenhagen, Denmark

  ⨯
• Jesper Eisfeldt ,

  Contributed equally to this work with: Lusine Nazaryan-Petersen, Jesper Eisfeldt, Zeynep Tümer, Anna Lindstrand

  Roles Data curation, Formal analysis, Investigation, Methodology, Software, Visualization, Writing – original draft, Writing – review & editing

  Affiliations Department of Molecular Medicine and Surgery, Center for Molecular Medicine, Karolinska Institute, Stockholm, Sweden, Science for Life Laboratory, Karolinska Institutet Science Park, Solna, Sweden

  http://orcid.org/0000-0003-3716-4917

  ⨯
• Maria Pettersson,

  Roles Formal analysis, Investigation, Validation, Writing – original draft, Writing – review & editing

  Affiliation Department of Molecular Medicine and Surgery, Center for Molecular Medicine, Karolinska Institute, Stockholm, Sweden

  http://orcid.org/0000-0003-3120-1625

  ⨯
• Johanna Lundin,

  Roles Formal analysis, Investigation, Visualization, Writing – review & editing

  Affiliations Department of Molecular Medicine and Surgery, Center for Molecular Medicine, Karolinska Institute, Stockholm, Sweden, Department of Clinical Genetics, Karolinska University Hospital, Stockholm, Sweden

  ⨯
• Daniel Nilsson,

  Roles Data curation, Formal analysis, Methodology, Software, Writing – review & editing

  Affiliations Department of Molecular Medicine and Surgery, Center for Molecular Medicine, Karolinska Institute, Stockholm, Sweden, Science for Life Laboratory, Karolinska Institutet Science Park, Solna, Sweden, Department of Clinical Genetics, Karolinska University Hospital, Stockholm, Sweden

  http://orcid.org/0000-0001-5831-385X

  ⨯
• Josephine Wincent,

  Roles Formal analysis, Writing – review & editing

  Affiliations Department of Molecular Medicine and Surgery, Center for Molecular Medicine, Karolinska Institute, Stockholm, Sweden, Department of Clinical Genetics, Karolinska University Hospital, Stockholm, Sweden

  ⨯
• Agne Lieden,

  Roles Formal analysis, Writing – review & editing

  Affiliations Department of Molecular Medicine and Surgery, Center for Molecular Medicine, Karolinska Institute, Stockholm, Sweden, Department of Clinical Genetics, Karolinska University Hospital, Stockholm, Sweden

  ⨯
• Lovisa Lovmar,

  Roles Formal analysis, Investigation, Resources, Writing – review & editing

  Affiliation Department of Clinical Genetics, Sahlgrenska University Hospital, Gothenburg, Sweden

  ⨯
• Jesper Ottosson,

  Roles Formal analysis, Investigation, Resources, Writing – review & editing

  Affiliation Department of Clinical Genetics, Sahlgrenska University Hospital, Gothenburg, Sweden

  ⨯
• Jelena Gacic,

  Roles Formal analysis, Investigation, Resources, Writing – review & editing

  Affiliation Department of Clinical Genetics, Linköping University Hospital, Linköping, Sweden

  http://orcid.org/0000-0002-1431-7792

  ⨯
• Outi Mäkitie,

  Roles Formal analysis, Investigation, Resources, Writing – review & editing

  Affiliations Department of Molecular Medicine and Surgery, Center for Molecular Medicine, Karolinska Institute, Stockholm, Sweden, Department of Clinical Genetics, Karolinska University Hospital, Stockholm, Sweden, Children’s Hospital, University of Helsinki and Helsinki University Hospital, Helsinki, Finland, Folkhälsan Institute of Genetics, Helsinki, Finland

  http://orcid.org/0000-0002-4547-001X

  ⨯
• Ann Nordgren,

  Roles Formal analysis, Resources, Writing – review & editing

  Affiliations Department of Molecular Medicine and Surgery, Center for Molecular Medicine, Karolinska Institute, Stockholm, Sweden, Department of Clinical Genetics, Karolinska University Hospital, Stockholm, Sweden

  ⨯
• Francesco Vezzi,

  Roles Methodology, Software, Writing – review & editing

  Current address: Devyser AB, Instrumentvägen 19, Hägersten, Sweden

  Affiliation SciLifeLab, Department of Biochemistry and Biophysics, Stockholm University, Stockholm, Sweden

  ⨯
• Valtteri Wirta,

  Roles Data curation, Methodology, Writing – review & editing

  Affiliations SciLifeLab, School of Engineering Sciences in Chemistry, Biotechnology and Health, KTH Royal Institute of Technology, Stockholm, Sweden, SciLifeLab, Department of Microbiology, Tumor and Cell biology, Karolinska Institutet, Stockholm, Sweden

  http://orcid.org/0000-0003-3811-5439

  ⨯
• Max Käller,

  Roles Data curation, Methodology, Writing – review & editing

  Affiliations SciLifeLab, School of Engineering Sciences in Chemistry, Biotechnology and Health, KTH Royal Institute of Technology, Stockholm, Sweden, SciLifeLab, Department of Microbiology, Tumor and Cell biology, Karolinska Institutet, Stockholm, Sweden

  http://orcid.org/0000-0001-6813-3051

  ⨯
• Tina Duelund Hjortshøj,

  Roles Formal analysis, Investigation, Resources, Writing – review & editing

  Affiliation Kennedy Center, Department of Clinical Genetics, Copenhagen University Hospital, Rigshospitalet, Glostrup, Denmark

  ⨯
• Cathrine Jespersgaard,

  Roles Formal analysis, Investigation, Writing – review & editing

  Affiliation Kennedy Center, Department of Clinical Genetics, Copenhagen University Hospital, Rigshospitalet, Glostrup, Denmark

  ⨯
• Rayan Houssari,

  Roles Validation, Writing – review & editing

  Affiliation Kennedy Center, Department of Clinical Genetics, Copenhagen University Hospital, Rigshospitalet, Glostrup, Denmark

  ⨯
• Laura Pignata,

  Roles Validation, Writing – review & editing

  Affiliation Kennedy Center, Department of Clinical Genetics, Copenhagen University Hospital, Rigshospitalet, Glostrup, Denmark

  ⨯
• Mads Bak,

  Roles Formal analysis, Investigation, Methodology, Software, Writing – review & editing

  Affiliation Wilhelm Johannsen Center for Functional Genome Research, Institute of Cellular and Molecular Medicine, University of Copenhagen, Copenhagen, Denmark

  ⨯
• Niels Tommerup,

  Roles Data curation, Formal analysis, Funding acquisition, Investigation, Methodology, Resources, Writing – review & editing

  Affiliation Wilhelm Johannsen Center for Functional Genome Research, Institute of Cellular and Molecular Medicine, University of Copenhagen, Copenhagen, Denmark

  http://orcid.org/0000-0003-2304-0112

  ⨯
• Elisabeth Syk Lundberg,

  Roles Formal analysis, Investigation, Writing – review & editing

  Affiliations Department of Molecular Medicine and Surgery, Center for Molecular Medicine, Karolinska Institute, Stockholm, Sweden, Department of Clinical Genetics, Karolinska University Hospital, Stockholm, Sweden

  http://orcid.org/0000-0001-5692-725X

  ⨯
• Zeynep Tümer ,

  Contributed equally to this work with: Lusine Nazaryan-Petersen, Jesper Eisfeldt, Zeynep Tümer, Anna Lindstrand

  Roles Conceptualization, Data curation, Formal analysis, Investigation, Resources, Supervision, Writing – original draft, Writing – review & editing

  * E-mail: anna.lindstrand@ki.se (AL); zeynep.tumer@regionh.dk (ZT)

  Affiliations Kennedy Center, Department of Clinical Genetics, Copenhagen University Hospital, Rigshospitalet, Glostrup, Denmark, Department of Clinical Medicine, Faculty of Health and Medical Sciences, University of Copenhagen, Denmark

  ⨯
•  [ ... ],
• Anna Lindstrand

  Contributed equally to this work with: Lusine Nazaryan-Petersen, Jesper Eisfeldt, Zeynep Tümer, Anna Lindstrand

  Roles Conceptualization, Data curation, Formal analysis, Funding acquisition, Investigation, Project administration, Resources, Supervision, Writing – original draft, Writing – review & editing

  * E-mail: anna.lindstrand@ki.se (AL); zeynep.tumer@regionh.dk (ZT)

  Affiliations Department of Molecular Medicine and Surgery, Center for Molecular Medicine, Karolinska Institute, Stockholm, Sweden, Department of Clinical Genetics, Karolinska University Hospital, Stockholm, Sweden

  http://orcid.org/0000-0003-0806-5602

  ⨯
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