Within-patient mutation frequencies reveal fitness costs of CpG dinucleotides and drastic amino acid changes in HIV

• Kristof Theys ,

  Contributed equally to this work with: Kristof Theys, Alison F. Feder, Maoz Gelbart, Marion Hartl

  Roles Data curation, Formal analysis, Methodology, Writing – review & editing

  Affiliation Clinical and Epidemiological Virology, Department of Microbiology and Immunology, Rega Institute for Medical Research, KU Leuven, University of Leuven, Leuven, Belgium

  http://orcid.org/0000-0003-0242-7000

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• Alison F. Feder ,

  Contributed equally to this work with: Kristof Theys, Alison F. Feder, Maoz Gelbart, Marion Hartl

  Roles Formal analysis, Methodology, Writing – review & editing

  Affiliation Department of Biology, Stanford University, Stanford, California, United States of America

  http://orcid.org/0000-0003-2915-089X

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• Maoz Gelbart ,

  Contributed equally to this work with: Kristof Theys, Alison F. Feder, Maoz Gelbart, Marion Hartl

  Roles Formal analysis, Methodology, Writing – review & editing

  Affiliation School of Molecular Cell Biology and Biotechnology, George S. Wise Faculty of Life Sciences, Tel Aviv University, Tel Aviv, Israel

  http://orcid.org/0000-0001-9268-9404

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• Marion Hartl ,

  Contributed equally to this work with: Kristof Theys, Alison F. Feder, Maoz Gelbart, Marion Hartl

  Roles Data curation, Formal analysis, Methodology, Writing – review & editing

  Affiliation Department of Biology, San Francisco State University, San Francisco, California, United States of America

  http://orcid.org/0000-0002-0525-1680

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• Adi Stern,

  Roles Writing – review & editing

  Affiliation School of Molecular Cell Biology and Biotechnology, George S. Wise Faculty of Life Sciences, Tel Aviv University, Tel Aviv, Israel

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• Pleuni S. Pennings

  Roles Conceptualization, Data curation, Formal analysis, Methodology, Writing – review & editing

  * E-mail: pennings@sfsu.edu

  Affiliation Department of Biology, San Francisco State University, San Francisco, California, United States of America

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