Massive lateral transfer of genes encoding plant cell wall-degrading enzymes to the mycoparasitic fungus Trichoderma from its plant-associated hosts

• Irina S. Druzhinina ,

  Roles Conceptualization, Data curation, Formal analysis, Funding acquisition, Investigation, Methodology, Project administration, Resources, Supervision, Validation, Visualization, Writing – original draft, Writing – review & editing

  * E-mail: irina.druzhinina@tuwien.ac.at (ISD); qirongshen@njau.edu.cn (QS)

  Affiliation Microbiology and Applied Genomics Group, Research Area Biochemical Technology, Institute of Chemical, Environmental & Bioscience Engineering, TU Wien, Vienna, Austria

  http://orcid.org/0000-0003-2821-5268

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• Komal Chenthamara,

  Roles Data curation, Formal analysis, Visualization, Writing – original draft, Writing – review & editing

  Affiliation Microbiology and Applied Genomics Group, Research Area Biochemical Technology, Institute of Chemical, Environmental & Bioscience Engineering, TU Wien, Vienna, Austria

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• Jian Zhang,

  Roles Formal analysis, Investigation, Resources, Visualization, Writing – review & editing

  Affiliation Jiangsu Provincial Key Lab of Organic Solid Waste Utilization, Nanjing Agricultural University, Nanjing, China

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• Lea Atanasova,

  Roles Data curation, Formal analysis

  Current address: University of Natural Resources and Life Sciences–BOKU, Institute of Food Technology, Vienna, Austria

  Affiliation Microbiology and Applied Genomics Group, Research Area Biochemical Technology, Institute of Chemical, Environmental & Bioscience Engineering, TU Wien, Vienna, Austria

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• Dongqing Yang,

  Roles Data curation

  Affiliation Jiangsu Provincial Key Lab of Organic Solid Waste Utilization, Nanjing Agricultural University, Nanjing, China

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• Youzhi Miao,

  Roles Data curation, Formal analysis

  Affiliation Jiangsu Provincial Key Lab of Organic Solid Waste Utilization, Nanjing Agricultural University, Nanjing, China

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• Mohammad J. Rahimi,

  Roles Investigation

  Affiliation Microbiology and Applied Genomics Group, Research Area Biochemical Technology, Institute of Chemical, Environmental & Bioscience Engineering, TU Wien, Vienna, Austria

  http://orcid.org/0000-0002-8444-8608

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• Marica Grujic,

  Roles Investigation

  Affiliation Microbiology and Applied Genomics Group, Research Area Biochemical Technology, Institute of Chemical, Environmental & Bioscience Engineering, TU Wien, Vienna, Austria

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• Feng Cai,

  Roles Investigation

  Affiliations Microbiology and Applied Genomics Group, Research Area Biochemical Technology, Institute of Chemical, Environmental & Bioscience Engineering, TU Wien, Vienna, Austria, Jiangsu Provincial Key Lab of Organic Solid Waste Utilization, Nanjing Agricultural University, Nanjing, China

  http://orcid.org/0000-0002-3998-3097

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• Shadi Pourmehdi,

  Roles Investigation

  Affiliation Microbiology and Applied Genomics Group, Research Area Biochemical Technology, Institute of Chemical, Environmental & Bioscience Engineering, TU Wien, Vienna, Austria

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• Kamariah Abu Salim,

  Roles Resources

  Affiliation Environmental and Life Sciences, Universiti Brunei Darussalam, Bandar Seri Begawan, Brunei Darussalam

  http://orcid.org/0000-0001-7819-5010

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• Carina Pretzer,

  Roles Investigation

  Affiliation Microbiology and Applied Genomics Group, Research Area Biochemical Technology, Institute of Chemical, Environmental & Bioscience Engineering, TU Wien, Vienna, Austria

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• Alexey G. Kopchinskiy,

  Roles Data curation, Resources

  Affiliation Microbiology and Applied Genomics Group, Research Area Biochemical Technology, Institute of Chemical, Environmental & Bioscience Engineering, TU Wien, Vienna, Austria

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• Bernard Henrissat,

  Roles Data curation

  Affiliations Architecture et Fonction des Macromolécules Biologiques, CNRS, Aix-Marseille Université, Marseille, France, INRA, USC 1408 AFMB, Marseille, France, Department of Biological Sciences, King Abdulaziz University, Jeddah, Saudi Arabia

  http://orcid.org/0000-0002-3434-8588

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• Alan Kuo,

  Roles Data curation

  Affiliation US Department of Energy Joint Genome Institute, Walnut Creek, CA, United States of America

  http://orcid.org/0000-0003-3514-3530

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• Hope Hundley,

  Roles Data curation

  Affiliation US Department of Energy Joint Genome Institute, Walnut Creek, CA, United States of America

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• Mei Wang,

  Roles Data curation

  Affiliation US Department of Energy Joint Genome Institute, Walnut Creek, CA, United States of America

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• Andrea Aerts,

  Roles Data curation

  Affiliation US Department of Energy Joint Genome Institute, Walnut Creek, CA, United States of America

  ⨯
• Asaf Salamov,

  Roles Data curation

  Affiliation US Department of Energy Joint Genome Institute, Walnut Creek, CA, United States of America

  ⨯
• Anna Lipzen,

  Roles Data curation

  Affiliation US Department of Energy Joint Genome Institute, Walnut Creek, CA, United States of America

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• Kurt LaButti,

  Roles Data curation

  Affiliation US Department of Energy Joint Genome Institute, Walnut Creek, CA, United States of America

  http://orcid.org/0000-0002-5838-1972

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• Kerrie Barry,

  Roles Data curation

  Affiliation US Department of Energy Joint Genome Institute, Walnut Creek, CA, United States of America

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• Igor V. Grigoriev,

  Roles Data curation, Funding acquisition, Resources, Writing – review & editing

  Affiliations US Department of Energy Joint Genome Institute, Walnut Creek, CA, United States of America, Department of Plant and Microbial Biology, University of California Berkeley, Berkeley, CA, United States of America

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• Qirong Shen ,

  Roles Funding acquisition, Resources

  * E-mail: irina.druzhinina@tuwien.ac.at (ISD); qirongshen@njau.edu.cn (QS)

  Affiliation Jiangsu Provincial Key Lab of Organic Solid Waste Utilization, Nanjing Agricultural University, Nanjing, China

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•  [ ... ],
• Christian P. Kubicek

  Roles Conceptualization, Data curation, Formal analysis, Investigation, Methodology, Writing – original draft, Writing – review & editing

  Current address: Vienna, Austria

  Affiliation Microbiology and Applied Genomics Group, Research Area Biochemical Technology, Institute of Chemical, Environmental & Bioscience Engineering, TU Wien, Vienna, Austria

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