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Appraising the relevance of DNA copy number loss and gain in prostate cancer using whole genome DNA sequence data
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Niedzica Camacho,
Roles Conceptualization, Data curation, Formal analysis, Investigation, Methodology, Software, Validation, Visualization, Writing – original draft, Writing – review & editing
Affiliations Division of Genetics and Epidemiology, The Institute Of Cancer Research, London, United Kingdom, Human Oncology and Pathogenesis Program, Memorial Sloan Kettering Cancer Center, New York, New York, United States of America, Marie-Josée and Henry R. Kravis Center for Molecular Oncology, Memorial Sloan Kettering Cancer Center, New York, New York, United States of America
⨯ - Peter Van Loo,
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Sandra Edwards,
Roles Investigation, Project administration, Writing – review & editing
Affiliation Division of Genetics and Epidemiology, The Institute Of Cancer Research, London, United Kingdom
⨯ - Jonathan D. Kay,
- Lucy Matthews,
- Kerstin Haase,
- Jeremy Clark,
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Nening Dennis,
Roles Investigation, Resources
Affiliation Cancer Genetics Unit, Royal Marsden NHS Foundation Trust, London, United Kingdom
⨯ - Sarah Thomas,
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Barbara Kremeyer,
Roles Data curation, Formal analysis
Affiliation Cancer, Ageing and Somatic Mutation, Wellcome Trust Sanger Institute, Hinxton, Cambridgeshire, United Kingdom
⨯ -
Jorge Zamora,
Roles Data curation, Investigation, Software
Affiliation Cancer, Ageing and Somatic Mutation, Wellcome Trust Sanger Institute, Hinxton, Cambridgeshire, United Kingdom
⨯ - Adam P. Butler,
- Gunes Gundem,
- Sue Merson,
- Hayley Luxton,
- Steve Hawkins,
- Mohammed Ghori,
- Luke Marsden,
- Adam Lambert,
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Katalin Karaszi,
Roles Investigation, Resources
Affiliations Department of Oncology, CRUK/MRC Oxford Institute for Radiation Oncology, Oxford, Oxfordshire, United Kingdom, Nuffield Department of Surgical Sciences, University of Oxford, Oxford, Oxfordshire, United Kingdom
⨯ - Gill Pelvender,
- Charlie E. Massie,
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Zsofia Kote-Jarai,
Roles Resources, Supervision
Affiliation Division of Genetics and Epidemiology, The Institute Of Cancer Research, London, United Kingdom
⨯ -
Keiran Raine,
Roles Resources, Software
Affiliation Cancer, Ageing and Somatic Mutation, Wellcome Trust Sanger Institute, Hinxton, Cambridgeshire, United Kingdom
⨯ -
David Jones,
Roles Resources, Software
Affiliation Cancer, Ageing and Somatic Mutation, Wellcome Trust Sanger Institute, Hinxton, Cambridgeshire, United Kingdom
⨯ -
William J. Howat,
Roles Investigation, Resources
Affiliation Histopathology and in situ hybridization Research Group, Cancer Research UK Cambridge Institute, Cambridge, Cambridgeshire, United Kingdom
⨯ - Steven Hazell,
- Naomi Livni,
- Cyril Fisher,
- Christopher Ogden,
- Pardeep Kumar,
- Alan Thompson,
- David Nicol,
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Erik Mayer,
Roles Investigation, Resources
Affiliation Cancer Genetics Unit, Royal Marsden NHS Foundation Trust, London, United Kingdom
⨯ -
Tim Dudderidge,
Roles Investigation, Resources
Affiliation Cancer Genetics Unit, Royal Marsden NHS Foundation Trust, London, United Kingdom
⨯ - Yongwei Yu,
- Hongwei Zhang,
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Nimish C. Shah,
Roles Investigation, Resources
Affiliation Department of Histopathology, Cambridge University Hospitals NHS Foundation Trust, Cambridge, Cambridgeshire, United Kingdom
⨯ -
Vincent J. Gnanapragasam,
Roles Investigation, Resources, Supervision
Affiliation Academic Urology Group, Department of Surgery, University of Cambridge, Cambridge, Cambridgeshire, United Kingdom
⨯ - The CRUK-ICGC Prostate Group ,
- William Isaacs,
- Tapio Visakorpi,
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Freddie Hamdy,
Roles Investigation, Resources
Affiliation Nuffield Department of Surgical Sciences, University of Oxford, Oxford, Oxfordshire, United Kingdom
⨯ -
Dan Berney,
Roles Investigation, Resources
Affiliation Centre for Molecular Oncology, Barts Cancer Institute, The Barts and London School of Medicine and Dentistry, Queen Mary University of London, London, United Kingdom
⨯ - Clare Verrill,
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Anne Y. Warren,
Roles Investigation, Resources
Affiliation Department of Histopathology, Cambridge University Hospitals NHS Foundation Trust, Cambridge, Cambridgeshire, United Kingdom
⨯ -
David C. Wedge,
Roles Project administration, Resources, Supervision, Writing – review & editing
Affiliations Cancer, Ageing and Somatic Mutation, Wellcome Trust Sanger Institute, Hinxton, Cambridgeshire, United Kingdom, Oxford Big Data Institute & Oxford Centre for Cancer Gene Research, Wellcome Trust Centre for Human Genetics, Oxford, Oxfordshire, United Kingdom
⨯ - Andrew G. Lynch ,
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Christopher S. Foster ,
Roles Funding acquisition, Investigation, Project administration, Resources, Writing – review & editing
¶‡ CSC and DSB are joint senior authors on this work. AGL, CSF, GSB, UM, DEN, RE, CSC, and DSB are senior principal investigators of this project and the CRUK-ICGC Prostate Group.
Affiliation HCA Pathology Laboratories, HCA Healthcare, London, United Kingdom
⨯ - Yong Jie Lu,
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G. Steven Bova ,
Roles Investigation, Resources, Supervision, Writing – review & editing
¶‡ CSC and DSB are joint senior authors on this work. AGL, CSF, GSB, UM, DEN, RE, CSC, and DSB are senior principal investigators of this project and the CRUK-ICGC Prostate Group.
Affiliation Faculty of Medicine and Life Sciences and BioMediTech Institute, University of Tampere and Tampere University Hospital, Tampere, Finland
⨯ - Hayley C. Whitaker,
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Ultan McDermott ,
Roles Funding acquisition, Investigation, Resources, Supervision
¶‡ CSC and DSB are joint senior authors on this work. AGL, CSF, GSB, UM, DEN, RE, CSC, and DSB are senior principal investigators of this project and the CRUK-ICGC Prostate Group.
Affiliation Cancer, Ageing and Somatic Mutation, Wellcome Trust Sanger Institute, Hinxton, Cambridgeshire, United Kingdom
⨯ - David E. Neal ,
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Rosalind Eeles ,
Roles Conceptualization, Funding acquisition, Investigation, Project administration, Resources, Supervision, Writing – review & editing
¶‡ CSC and DSB are joint senior authors on this work. AGL, CSF, GSB, UM, DEN, RE, CSC, and DSB are senior principal investigators of this project and the CRUK-ICGC Prostate Group.
Affiliations Division of Genetics and Epidemiology, The Institute Of Cancer Research, London, United Kingdom, Cancer Genetics Unit, Royal Marsden NHS Foundation Trust, London, United Kingdom
⨯ - Colin S. Cooper ,
- [ ... ],
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Daniel S. Brewer
Roles Conceptualization, Data curation, Formal analysis, Investigation, Methodology, Project administration, Resources, Software, Supervision, Validation, Visualization, Writing – original draft, Writing – review & editing
* E-mail: d.brewer@uea.ac.uk
¶‡ CSC and DSB are joint senior authors on this work. AGL, CSF, GSB, UM, DEN, RE, CSC, and DSB are senior principal investigators of this project and the CRUK-ICGC Prostate Group.
Affiliations Norwich Medical School, University of East Anglia, Norwich, Norfolk, United Kingdom, Organisms and Ecosystems, The Earlham Institute, Norwich, Norfolk, United Kingdom
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http://orcid.org/0000-0002-0724-760X
Appraising the relevance of DNA copy number loss and gain in prostate cancer using whole genome DNA sequence data
- Niedzica Camacho,
- Peter Van Loo,
- Sandra Edwards,
- Jonathan D. Kay,
- Lucy Matthews,
- Kerstin Haase,
- Jeremy Clark,
- Nening Dennis,
- Sarah Thomas,
- Barbara Kremeyer
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- Published: September 25, 2017
- https://doi.org/10.1371/journal.pgen.1007001