The population genomics of archaeological transition in west Iberia: Investigation of ancient substructure using imputation and haplotype-based methods

• Rui Martiniano ,

  Roles Conceptualization, Data curation, Formal analysis, Investigation, Methodology, Project administration, Resources, Software, Validation, Visualization, Writing – original draft, Writing – review & editing

  * E-mail: dbradley@tcd.ie (DGB); ruidlpm@gmail.com (RM)

  Current address: Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Cambridge, United Kingdom

  Affiliations Smurfit Institute of Genetics, School of Genetics and Microbiology, Trinity College Dublin, Dublin, Ireland, Research Centre for Anthropology and Health, Department of Life Sciences, University of Coimbra, Coimbra, Portugal

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• Lara M. Cassidy,

  Roles Conceptualization, Data curation, Formal analysis, Investigation, Methodology, Project administration, Resources, Software, Validation, Visualization, Writing – original draft, Writing – review & editing

  Affiliation Smurfit Institute of Genetics, School of Genetics and Microbiology, Trinity College Dublin, Dublin, Ireland

  http://orcid.org/0000-0001-5005-1963

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• Ros Ó'Maoldúin,

  Roles Resources, Writing – review & editing

  Affiliations Smurfit Institute of Genetics, School of Genetics and Microbiology, Trinity College Dublin, Dublin, Ireland, The Irish Fieldschool of Prehistoric Archaeology, Department of Archaeology, NUI Galway, Galway, Ireland

  http://orcid.org/0000-0002-2014-9713

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• Russell McLaughlin,

  Roles Formal analysis, Investigation, Methodology, Project administration, Resources, Software, Validation, Writing – review & editing

  Affiliation Smurfit Institute of Genetics, School of Genetics and Microbiology, Trinity College Dublin, Dublin, Ireland

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• Nuno M. Silva,

  Roles Data curation, Formal analysis, Investigation, Methodology, Project administration, Resources, Software, Validation, Writing – review & editing

  Affiliation Department of Genetics & Evolution - Anthropology Unit, University of Geneva, Switzerland

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• Licinio Manco,

  Roles Resources, Writing – review & editing

  Affiliation Research Centre for Anthropology and Health, Department of Life Sciences, University of Coimbra, Coimbra, Portugal

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• Daniel Fidalgo,

  Roles Resources, Writing – review & editing

  Affiliation Research Centre for Anthropology and Health, Department of Life Sciences, University of Coimbra, Coimbra, Portugal

  http://orcid.org/0000-0001-7175-1686

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• Tania Pereira,

  Roles Resources, Writing – review & editing

  Affiliation Research Centre for Anthropology and Health, Department of Life Sciences, University of Coimbra, Coimbra, Portugal

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• Maria J. Coelho,

  Roles Resources, Writing – review & editing

  Affiliation Research Centre for Anthropology and Health, Department of Life Sciences, University of Coimbra, Coimbra, Portugal

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• Miguel Serra,

  Roles Resources, Writing – review & editing

  Affiliation Palimpsesto - Estudo e Preservação do Património Cultural Lda., Coimbra, Portugal

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• Joachim Burger,

  Roles Funding acquisition, Resources, Writing – review & editing

  Affiliation Palaeogenetics Group, Johannes Gutenberg University, Mainz, Germany

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• Rui Parreira,

  Roles Resources, Writing – review & editing

  Affiliation Workgroup on Ancient Peasant Societies, University of Lisbon Archaeological Center, Lisboa, Portugal

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• Elena Moran,

  Roles Resources, Writing – review & editing

  Affiliation Workgroup on Ancient Peasant Societies, University of Lisbon Archaeological Center, Lisboa, Portugal

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• Antonio C. Valera,

  Roles Resources, Writing – review & editing

  Affiliations Nucleo de Investigação Arqueologica - ERA Arqueologia, Cruz Quebrada, Portugal, Interdisciplinary Center for Archaeology and Evolution of Human Behavior – University of Algarve, Faro, Portugal

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• Eduardo Porfirio,

  Roles Resources, Writing – review & editing

  Affiliation Palimpsesto - Estudo e Preservação do Património Cultural Lda., Coimbra, Portugal

  http://orcid.org/0000-0001-9816-8327

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• Rui Boaventura †,

  † Deceased.

  Roles Resources, Writing – review & editing

  Affiliation Workgroup on Ancient Peasant Societies, University of Lisbon Archaeological Center, Lisboa, Portugal

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• Ana M. Silva,

  Roles Conceptualization, Methodology, Project administration, Resources, Writing – review & editing

  Affiliations Research Centre for Anthropology and Health, Department of Life Sciences, University of Coimbra, Coimbra, Portugal, Workgroup on Ancient Peasant Societies, University of Lisbon Archaeological Center, Lisboa, Portugal, Laboratory of Forensic Anthropology, Centre for Functional Ecology, Department of Life Sciences, University of Coimbra, Calçada Martim de Freitas, Coimbra, Portugal

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•  [ ... ],
• Daniel G. Bradley

  Roles Conceptualization, Data curation, Formal analysis, Funding acquisition, Investigation, Methodology, Project administration, Resources, Supervision, Validation, Visualization, Writing – original draft, Writing – review & editing

  * E-mail: dbradley@tcd.ie (DGB); ruidlpm@gmail.com (RM)

  Affiliation Smurfit Institute of Genetics, School of Genetics and Microbiology, Trinity College Dublin, Dublin, Ireland

  http://orcid.org/0000-0001-7335-7092

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