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Open Access
Peer-reviewed
Research Article
Demographically-Based Evaluation of Genomic Regions under Selection in Domestic Dogs
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Adam H. Freedman ,
* E-mail: adamfreedman@fas.harvard.edu
Affiliation Department of Ecology and Evolutionary Biology, University of California, Los Angeles, Los Angeles, California, United States of America
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Rena M. Schweizer,
Affiliation Department of Ecology and Evolutionary Biology, University of California, Los Angeles, Los Angeles, California, United States of America
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Diego Ortega-Del Vecchyo,
Affiliation Department of Ecology and Evolutionary Biology, University of California, Los Angeles, Los Angeles, California, United States of America
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Eunjung Han,
Affiliation Department of Ecology and Evolutionary Biology, University of California, Los Angeles, Los Angeles, California, United States of America
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Brian W. Davis,
Affiliation National Human Genome Research Institute, National Institutes of Health, Bethesda, Maryland, United States of America
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Ilan Gronau,
Affiliation Department of Biological Statistics and Computational Biology, Cornell University, Ithaca, New York, United States of America
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Pedro M. Silva,
Affiliation CIBIO-UP, University of Porto, Vairão, Portugal
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Marco Galaverni,
Affiliation ISPRA, Ozzano dell'Emilia, Italy
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Zhenxin Fan,
Affiliation Key Laboratory of Bioresources and Ecoenvironment, Sichuan University, Chengdu, China
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Peter Marx,
Affiliation Department of Measurement and Information Systems, Budapest University of Technology and Economics, Budapest, Hungary
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Belen Lorente-Galdos,
Affiliation ICREA at Institut de Biologia Evolutiva (CSIC-Universitat Pompeu Fabra), Barcelona, Spain
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Oscar Ramirez,
Affiliation ICREA at Institut de Biologia Evolutiva (CSIC-Universitat Pompeu Fabra), Barcelona, Spain
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Farhad Hormozdiari,
Affiliation Department of Computer Science, University of California, Los Angeles, Los Angeles, California, United States of America
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Can Alkan,
Affiliation Bilkent University, Ankara, Turkey
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Carles Vilà,
Affiliation Estación Biológia de Doñana EBD-CSIC, Sevilla, Spain
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Kevin Squire,
Affiliation Department of Human Genetics, University of California, Los Angeles, Los Angeles, California, United States of America
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Eli Geffen,
Affiliation Department of Zoology, Tel Aviv University, Tel Aviv, Israel
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Josip Kusak,
Affiliation Department of Biology, University of Zagreb, Zagreb, Croatia
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Adam R. Boyko,
Affiliation Department of Biomedical Sciences, Cornell University, Ithaca, New York, United States of America
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Heidi G. Parker,
Affiliation ICREA at Institut de Biologia Evolutiva (CSIC-Universitat Pompeu Fabra), Barcelona, Spain
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Clarence Lee,
Affiliation Life Technologies, Foster City, California, United States of America
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Vasisht Tadigotla,
Affiliation Life Technologies, Foster City, California, United States of America
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Adam Siepel,
Affiliation Simons Center for Quantitative Biology, Cold Spring Harbor Laboratory, Cold Spring Harbor, New York, United States of America
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Carlos D. Bustamante,
Affiliation Stanford School of Medicine, Stanford, California, United States of America
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Timothy T. Harkins,
Affiliation Life Technologies, Foster City, California, United States of America
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Stanley F. Nelson,
Affiliation Department of Human Genetics, University of California, Los Angeles, Los Angeles, California, United States of America
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Tomas Marques-Bonet,
Affiliations ICREA at Institut de Biologia Evolutiva (CSIC-Universitat Pompeu Fabra), Barcelona, Spain, Centro Nacional de Analisis Genomico (CNAG/PCB), Baldiri Reixach 4–8, Barcelona, Spain
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Elaine A. Ostrander,
Affiliation National Human Genome Research Institute, National Institutes of Health, Bethesda, Maryland, United States of America
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Robert K. Wayne,
Affiliation Department of Ecology and Evolutionary Biology, University of California, Los Angeles, Los Angeles, California, United States of America
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John Novembre
Current address: Department of Human Genetics, University of Chicago, Chicago, Illinois, United States of America
Affiliation Department of Ecology and Evolutionary Biology, University of California, Los Angeles, Los Angeles, California, United States of America
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Demographically-Based Evaluation of Genomic Regions under Selection in Domestic Dogs
- Adam H. Freedman,
- Rena M. Schweizer,
- Diego Ortega-Del Vecchyo,
- Eunjung Han,
- Brian W. Davis,
- Ilan Gronau,
- Pedro M. Silva,
- Marco Galaverni,
- Zhenxin Fan,
- Peter Marx
- Published: March 4, 2016
- https://doi.org/10.1371/journal.pgen.1005851