Rearrangements of 2.5 Kilobases of Noncoding DNA from the Drosophila even-skipped Locus Define Predictive Rules of Genomic cis-Regulatory Logic

• Ah-Ram Kim,

  Affiliations Department of Ecology and Evolution, Chicago Center for Systems Biology, University of Chicago, Chicago, Illinois, United States of America, Department of Biochemistry and Cell Biology, Stony Brook University, Stony Brook, New York, United States of America

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• Carlos Martinez,

  Affiliation Department of Ecology and Evolution, Chicago Center for Systems Biology, University of Chicago, Chicago, Illinois, United States of America

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• John Ionides,

  Affiliation Department of Biochemistry, University of Cambridge, Cambridge, United Kingdom

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• Alexandre F. Ramos,

  Affiliation Escola de Artes, Ciências e Humanidades, Universidade de São Paulo, São Paulo, Brazil

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• Michael Z. Ludwig,

  Affiliation Department of Ecology and Evolution, Chicago Center for Systems Biology, University of Chicago, Chicago, Illinois, United States of America

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• Nobuo Ogawa,

  Affiliation Genomics Division, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America

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• David H. Sharp,

  Affiliation Theoretical Division, Los Alamos National Laboratory, Los Alamos, New Mexico, United States of America

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• John Reinitz

  * E-mail: reinitz@galton.uchicago.edu

  Affiliations Department of Ecology and Evolution, Chicago Center for Systems Biology, University of Chicago, Chicago, Illinois, United States of America, Department of Statistics, Department of Molecular Genetics and Cell Biology, and Institute of Genomics and Systems Biology, University of Chicago, Chicago, Illinois, United States of America

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