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Open Access
Peer-reviewed
Research Article
Comparative Genome Structure, Secondary Metabolite, and Effector Coding Capacity across Cochliobolus Pathogens
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Bradford J. Condon ,
Contributed equally to this work with: Bradford J. Condon, Yueqiang Leng, Dongliang Wu
Affiliation Department of Plant Pathology and Plant-Microbe Biology, Cornell University, Ithaca, New York, United States of America
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Yueqiang Leng ,
Contributed equally to this work with: Bradford J. Condon, Yueqiang Leng, Dongliang Wu
Affiliation Department of Plant Pathology, North Dakota State University, Fargo, North Dakota, United States of America
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Dongliang Wu ,
Contributed equally to this work with: Bradford J. Condon, Yueqiang Leng, Dongliang Wu
Affiliation Department of Plant Pathology and Plant-Microbe Biology, Cornell University, Ithaca, New York, United States of America
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Kathryn E. Bushley,
Affiliation Department of Botany and Plant Pathology, Oregon State University, Corvallis, Oregon, United States of America
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Robin A. Ohm,
Affiliation United States Department of Energy (DOE) Joint Genome Institute (JGI), Walnut Creek, California, United States of America
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Robert Otillar,
Affiliation United States Department of Energy (DOE) Joint Genome Institute (JGI), Walnut Creek, California, United States of America
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Joel Martin,
Affiliation United States Department of Energy (DOE) Joint Genome Institute (JGI), Walnut Creek, California, United States of America
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Wendy Schackwitz,
Affiliation United States Department of Energy (DOE) Joint Genome Institute (JGI), Walnut Creek, California, United States of America
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Jane Grimwood,
Affiliation HudsonAlpha Institute for Biotechnology, Huntsville, Alabama, United States of America
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NurAinIzzati MohdZainudin,
Affiliations Department of Plant Pathology and Plant-Microbe Biology, Cornell University, Ithaca, New York, United States of America, Department of Biology, Faculty of Science, Universiti Putra Malaysia, Serdang, Selangor, Malaysia
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Chunsheng Xue,
Affiliations Department of Plant Pathology and Plant-Microbe Biology, Cornell University, Ithaca, New York, United States of America, College of Plant Protection, Shenyang Agricultural University, Shenyang, China
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Rui Wang,
Affiliation Department of Plant Pathology, North Dakota State University, Fargo, North Dakota, United States of America
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Viola A. Manning,
Affiliation Department of Botany and Plant Pathology, Oregon State University, Corvallis, Oregon, United States of America
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Braham Dhillon,
Affiliation Department of Forest Sciences, University of British Columbia, Vancouver, Canada
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Zheng Jin Tu,
Affiliation Supercomputing Institute for Advanced Computational Research, University of Minnesota, Minneapolis, Minnesota, United States of America
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Brian J. Steffenson,
Affiliation Department of Plant Pathology, University of Minnesota, St. Paul, Minnesota, United States of America
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Asaf Salamov,
Affiliation United States Department of Energy (DOE) Joint Genome Institute (JGI), Walnut Creek, California, United States of America
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Hui Sun,
Affiliation United States Department of Energy (DOE) Joint Genome Institute (JGI), Walnut Creek, California, United States of America
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Steve Lowry,
Affiliation United States Department of Energy (DOE) Joint Genome Institute (JGI), Walnut Creek, California, United States of America
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Kurt LaButti,
Affiliation United States Department of Energy (DOE) Joint Genome Institute (JGI), Walnut Creek, California, United States of America
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James Han,
Affiliation United States Department of Energy (DOE) Joint Genome Institute (JGI), Walnut Creek, California, United States of America
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Alex Copeland,
Affiliation United States Department of Energy (DOE) Joint Genome Institute (JGI), Walnut Creek, California, United States of America
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Erika Lindquist,
Affiliation United States Department of Energy (DOE) Joint Genome Institute (JGI), Walnut Creek, California, United States of America
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Kerrie Barry,
Affiliation United States Department of Energy (DOE) Joint Genome Institute (JGI), Walnut Creek, California, United States of America
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Jeremy Schmutz,
Affiliations United States Department of Energy (DOE) Joint Genome Institute (JGI), Walnut Creek, California, United States of America, HudsonAlpha Institute for Biotechnology, Huntsville, Alabama, United States of America
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Scott E. Baker,
Affiliation Pacific Northwest National Laboratory, Richland, Washington, United States of America
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Lynda M. Ciuffetti,
Affiliation Department of Botany and Plant Pathology, Oregon State University, Corvallis, Oregon, United States of America
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Igor V. Grigoriev,
Affiliation United States Department of Energy (DOE) Joint Genome Institute (JGI), Walnut Creek, California, United States of America
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Shaobin Zhong ,
* E-mail: bgt1@cornell.edu (BGT); shaobin.zhong@ndsu.edu (SZ)
¶These authors were joint senior authors on this work.
Affiliation Department of Plant Pathology, North Dakota State University, Fargo, North Dakota, United States of America
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B. Gillian Turgeon
* E-mail: bgt1@cornell.edu (BGT); shaobin.zhong@ndsu.edu (SZ)
¶These authors were joint senior authors on this work.
Affiliation Department of Plant Pathology and Plant-Microbe Biology, Cornell University, Ithaca, New York, United States of America
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Comparative Genome Structure, Secondary Metabolite, and Effector Coding Capacity across Cochliobolus Pathogens
- Bradford J. Condon,
- Yueqiang Leng,
- Dongliang Wu,
- Kathryn E. Bushley,
- Robin A. Ohm,
- Robert Otillar,
- Joel Martin,
- Wendy Schackwitz,
- Jane Grimwood,
- NurAinIzzati MohdZainudin
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- Published: January 24, 2013
- https://doi.org/10.1371/journal.pgen.1003233