Transcription Initiation Patterns Indicate Divergent Strategies for Gene Regulation at the Chromatin Level

Elizabeth A. Rach; Deborah R. Winter; Ashlee M. Benjamin; David L. Corcoran; Ting Ni; Jun Zhu; Uwe Ohler

doi:10.1371/journal.pgen.1001274

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Peer-reviewed

Research Article

Transcription Initiation Patterns Indicate Divergent Strategies for Gene Regulation at the Chromatin Level

Elizabeth A. Rach ,

Contributed equally to this work with: Elizabeth A. Rach, Deborah R. Winter

Affiliation Program in Computational Biology and Bioinformatics, Duke University, Durham, North Carolina, United States of America
⨯
Deborah R. Winter ,

Contributed equally to this work with: Elizabeth A. Rach, Deborah R. Winter

Affiliation Program in Computational Biology and Bioinformatics, Duke University, Durham, North Carolina, United States of America
⨯
Ashlee M. Benjamin,

Affiliation Program in Computational Biology and Bioinformatics, Duke University, Durham, North Carolina, United States of America
⨯
David L. Corcoran,

Affiliation Institute for Genome Sciences and Policy, Duke University Medical Center, Durham, North Carolina, United States of America
⨯
Ting Ni,

Current address: Genetics and Development Biology Center, National Heart, Lung, and Blood Institute, National Institutes of Health, Bethesda, Maryland, United States of America

Affiliations Institute for Genome Sciences and Policy, Duke University Medical Center, Durham, North Carolina, United States of America, Department of Cell Biology, Duke University, Durham, North Carolina, United States of America
⨯
Jun Zhu,

Current address: Genetics and Development Biology Center, National Heart, Lung, and Blood Institute, National Institutes of Health, Bethesda, Maryland, United States of America

Affiliations Institute for Genome Sciences and Policy, Duke University Medical Center, Durham, North Carolina, United States of America, Department of Cell Biology, Duke University, Durham, North Carolina, United States of America
⨯
Uwe Ohler

* E-mail: Uwe.Ohler@duke.edu

Affiliations Institute for Genome Sciences and Policy, Duke University Medical Center, Durham, North Carolina, United States of America, Department of Biostatistics and Bioinformatics, Duke University School of Medicine, Durham, North Carolina, United States of America, Department of Computer Science, Duke University, Durham, North Carolina, United States of America
⨯

Transcription Initiation Patterns Indicate Divergent Strategies for Gene Regulation at the Chromatin Level

Elizabeth A. Rach,
Deborah R. Winter,
Ashlee M. Benjamin,
David L. Corcoran,
Ting Ni,
Jun Zhu,
Uwe Ohler

Published: January 13, 2011
https://doi.org/10.1371/journal.pgen.1001274

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Nucleosomes
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Chromatin
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DNA methylation
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Insulators
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Drosophila melanogaster
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Invertebrate genomics
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Gene expression
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Sequence motif analysis
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