Maternal and zygotic gene regulatory effects of endogenous RNAi pathways

Miguel Vasconcelos Almeida; António Miguel de Jesus Domingues; René F. Ketting

doi:10.1371/journal.pgen.1007784

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Peer-reviewed

Research Article

Maternal and zygotic gene regulatory effects of endogenous RNAi pathways

Miguel Vasconcelos Almeida ,

Contributed equally to this work with: Miguel Vasconcelos Almeida, António Miguel de Jesus Domingues

Roles Conceptualization, Formal analysis, Investigation, Visualization, Writing – original draft, Writing – review & editing

Affiliations Biology of Non-coding RNA Group, Institute of Molecular Biology, Ackermannweg 4, Mainz, Germany, International PhD Programme on Gene Regulation, Epigenetics & Genome Stability, Mainz, Germany

http://orcid.org/0000-0002-4816-3111

⨯
António Miguel de Jesus Domingues ,

Contributed equally to this work with: Miguel Vasconcelos Almeida, António Miguel de Jesus Domingues

Roles Formal analysis, Software, Visualization, Writing – review & editing

Affiliation Biology of Non-coding RNA Group, Institute of Molecular Biology, Ackermannweg 4, Mainz, Germany

http://orcid.org/0000-0002-1803-1863

⨯
René F. Ketting

Roles Conceptualization, Funding acquisition, Project administration, Supervision, Writing – review & editing

* E-mail: r.ketting@imb.de

Affiliation Biology of Non-coding RNA Group, Institute of Molecular Biology, Ackermannweg 4, Mainz, Germany

http://orcid.org/0000-0001-6161-5621

⨯

Maternal and zygotic gene regulatory effects of endogenous RNAi pathways

Miguel Vasconcelos Almeida,
António Miguel de Jesus Domingues,
René F. Ketting

Published: February 13, 2019
https://doi.org/10.1371/journal.pgen.1007784
See the preprint

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Reporting minor error

Posted by malmeida215 on 11 Aug 2020 at 19:58 GMT

In figures 6D, 7 and S4 we have labeled the y-axis of the mRNA plots with 'RPKM'. This should be RPM instead.

In the methods subsection "mRNA read processing and mapping" the sentence "Coverage tracks were generated with deepTools v2.4.3 (bamCoverage–smoothLength 60 –binSize 20 –normalizeUsingRPKM) [75]" Should be replaced with: "Coverage tracks were generated with either deepTools v2.4.3 (bamCoverage–smoothLength 60 –binSize 20 –normalizeUsingRPKM) [75] to generate RPKM normalized tracks, or with Bedtools (genomeCoverageBed -bg -split -scale -ibam -g) [72], followed by bedGraphToBigWig, to summarize genome coverage normalized to mapped reads * 1 million (RPM)."

We, the authors, apologize for any inconvenience this may have caused.

Best regards,
Miguel V. Almeida, António M.J. Domingues, René F. Ketting

No competing interests declared.

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Maternal and zygotic gene regulatory effects of endogenous RNAi pathways

Maternal and zygotic gene regulatory effects of endogenous RNAi pathways

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Reporting minor error

Posted by malmeida215 on 11 Aug 2020 at 19:58 GMT