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Transcriptome analysis

Explainable computational framework for subtype classification and biomarker identification in head and neck squamous cell carcinoma using machine learning

Anagha Rajan, Christopher Leela Biji, Mangalam Goutam Sinha, Iyappan Ramalakshmi Oviya

A mucosal barrier injury related six gene transcriptomic signature associated with ulcerative colitis using machine learning and public transcriptomic data

Sen He, Pingliang Sun, Xiaoxin Duan

Comparative transcriptomic responses of tomato to Xanthomonas strains isolated from different hosts

Lorena Sánchez-Giménez, Eugenio Llorens, [ ... ], Gemma Camañes

Sex- and age-specific development of ssRNA virus receptor expression in the human brain

Leanne Monteiro, Negeen Halabian, [ ... ], Kathryn M. Murphy

Exploratory baseline mucosal transcriptomics and vedolizumab response in ulcerative colitis

Liang Zhang, Jian Liu, [ ... ], Yali Wang

Lens dislocation, OCTA, and archived FBN1 reports: An exploratory study

Muhammer Özgür Çevik, Metehan Simsek, Sadik Gorkem Cevik, Irfan Perente

A public-data audit of transcriptomic prognostic transportability in R-CHOP-treated diffuse large B-cell lymphoma

Yongqing Li, Guowei Xiong, [ ... ], Lin Lin

Multi-cohort transcriptomics and donor-aware single-cell analyses prioritize S100A8 within an emergency-myeloid, HLA-DR-low state in sepsis

Changlong Zhang, Qianqian Cui, [ ... ], Liang Chu

Quantifying the diagnostic time gap in precision oncology: A retrospective analysis of potential time savings from same-day cartridge-based molecular testing versus next-generation sequencing in cytology specimens

Kevin Tran, Eveline Chen, W. Fraser Symmans, Gloria Hopkins Sura

Identification of SGK1 as a candidate regulator associated with myeloid cell senescence in ME/CFS: An integrative transcriptomic and experimental study

Yan Jin, Rui Qin, [ ... ], Xinghua Chen

Structure-based discovery of a novel Granzyme A (GZMA) inhibitor for autism spectrum disorder through integrative transcriptomics, virtual screening, and long-timescale molecular dynamics simulations

Metab Alharbi, Abdulrahman Alshammari, [ ... ], Talal Alshammari

Single-cell transcriptomics and machine learning characterize LTA4H-linked lipid metabolism and inflammatory signatures in the knee osteoarthritis IPFP/synovium compartment

Xin Chen, Shudong Li, [ ... ], Jifeng Zhao

Integrated bioinformatics analysis identifies an immune-related gene signature associated with non-obstructive azoospermia

Yucheng Zhong, Songqing Ye, [ ... ], Xiaofu Qiu

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