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Transcriptome analysis

CAPRG: Sequence Assembling Pipeline for Next Generation Sequencing of Non-Model Organisms

Arun Rawat, Mohamed O. Elasri, [ ... ], Edward J. Perkins

Knowledge-Based Reconstruction of mRNA Transcripts with Short Sequencing Reads for Transcriptome Research

Junhee Seok, Weihong Xu, [ ... ], Wenzhong Xiao

NGS QC Toolkit: A Toolkit for Quality Control of Next Generation Sequencing Data

Ravi K. Patel, Mukesh Jain

Myocardial Alternative RNA Splicing and Gene Expression Profiling in Early Stage Hypoplastic Left Heart Syndrome

Marco Ricci, Yanji Xu, [ ... ], Joy Lincoln

A Powerful Method for Transcriptional Profiling of Specific Cell Types in Eukaryotes: Laser-Assisted Microdissection and RNA Sequencing

Marc W. Schmid, Anja Schmidt, [ ... ], Ueli Grossniklaus

Characterization and Comparison of the Leukocyte Transcriptomes of Three Cattle Breeds

Wen Huang, Asif Nadeem, [ ... ], Hasan Khatib

Environmental Factors Affecting the Expression of pilAB as Well as the Proteome and Transcriptome of the Grass Endophyte Azoarcus sp. Strain BH72

Lena Hauberg-Lotte, Hannah Klingenberg, [ ... ], Barbara Reinhold-Hurek

RNA-Seq Based Transcriptional Map of Bovine Respiratory Disease Pathogen “Histophilus somni 2336”

Ranjit Kumar, Mark L. Lawrence, [ ... ], Bindu Nanduri

Fast Computation and Applications of Genome Mappability

Thomas Derrien, Jordi Estellé, [ ... ], Paolo Ribeca

Broad Phylogenomic Sampling and the Sister Lineage of Land Plants

Ruth E. Timme, Tsvetan R. Bachvaroff, Charles F. Delwiche

A Temporal -omic Study of Propionibacterium freudenreichii CIRM-BIA1^T Adaptation Strategies in Conditions Mimicking Cheese Ripening in the Cold

Marion Dalmasso, Julie Aubert, [ ... ], Anne Thierry

Transcriptome-Based Differentiation of Closely-Related Miscanthus Lines

Philippe Chouvarine, Amanda M. Cooksey, [ ... ], Daniel G. Peterson

Customisation of the Exome Data Analysis Pipeline Using a Combinatorial Approach

Swetansu Pattnaik, Srividya Vaidyanathan, [ ... ], Binay Panda

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