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Transcriptional control

Putative anaerobic transformation pathway of microcystin-RR inferred from ¹⁵N labeling and multi-omics in an enriched shrimp pond sediment microbial community

Chuanyin Liu, Jingjing Zhang, Rui Chen, Xiangdong Bi, Wei Dai, Wenjie Zhao, Dajuan Zhang, Qian Wang, Xinyu Wang

published 19 Aug 2026

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Uncovering the molecular landscape of young-onset diffuse gastric cancer: A relieff-based feature selection analysis on RNA-Seq data

Zahra Khalili Azni, Matia Sadat Borhani, Hossein Sabouri, Sayed Javad Sajadi, Maryam Pasandideh Arjmand

published 06 Aug 2026

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Integrated transcriptomic analysis of LMB2-induced podocyte injury identifies conserved inflammatory and adaptive stress responses

Mohammad-Reza Esmaeili, Marjan Nejati, Shaqayeq Roqanian, Reza Moghadasali, Sara Taleahmad

published 31 Jul 2026

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What topological and geometric structure do biological foundation models learn? Evidence from 141 hypotheses

Ihor Kendiukhov

published 17 Jul 2026

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Dysregulated glucocorticoid-responsive immune genes in peripheral blood mononuclear cells as a shared molecular signature of autism spectrum disorder and irritable bowel syndrome

Kuo Zhang, Fangfang Mou, Jing Liu, Jianzhong Wang

published 09 Jul 2026

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The role of SALL1-MGST1 axis-mediated ferroptosis inhibition in chemoresistance of retinoblastoma

Zhuang Xiong, Weiwei Zhang, Xuebing Yu, Ruoshu Gu, Xue Zhang

published 06 Jul 2026

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Genetic regulatory axis between AGR2 and ESR1 promotes breast cancer progression

M. Aiman Mohtar, Delphine Fessart, Chia Yuh Cai, Syazalina Zahari, Saiful Effendi Syafruddin, Muhammad-Redha Abdullah-Zawawi, Valerie Le Morvan, Said Taouji, Ted Hupp

published 01 Jul 2026

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RAGER: A user-friendly computational platform for integrated analysis of RNA-Seq and ATAC-seq data

Yunjie Liu, Yijia Liu, Zhouming Zhang, Fei Li, Hua Yu, Lu Lu

published 22 May 2026

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Molecular and structural reprogramming of gastric cancer revealed by systems-level transcriptomic analysis

Negar Mottaghi-Dastjerdi, Mohammad Soltany-Rezaee-Rad

published 21 May 2026

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Unraveling the role of ChREBP in lung adenocarcinoma: Expression, regulatory networks, and potential functional impact

Athisake Ruangpracha, Chanachai Sae-Lee, Pitaksin Chitta, Harald Grove, Pranisa Jamjuntra, Warisa Amornrit, Prapat Suriyaphol, Chanitra Thuwajit, Naravat Poungvarin

published 30 Apr 2026

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Single-cell atlas of gastric cancer reveals malignant epithelial evolution and regulatory reprogramming of the tumor microenvironment

Xiulan Li, Mengqi Guo, Yunhan Wen, Bo Long

published 22 Apr 2026

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FOXO1 transcription factor modulates airway epithelial responses to viral infection

Nadia M. Daniel, Ritu Mann-Nüttel, Nami Shrestha Palikhe, Joaquin López-Orozco, Tom Hobman, Paul Forsythe, Harissios Vliagoftis

published 03 Apr 2026

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Distribution and evolution of the LysR-type transcriptional regulators of the Salmonella genus

Dávila S., Rivera-Ramírez A., Gama-Martínez Y., Orozco R., Hernández V. M., Hernández-Lucas I.

published 17 Mar 2026

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