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Transcriptional control

ILF3 regulates erythroid differentiation: A single-cell transcriptomic analysis and cellular experiment

Xiaojing Wu, Meng Lu, [ ... ], Yunyan He

Putative anaerobic transformation pathway of microcystin-RR inferred from ¹⁵N labeling and multi-omics in an enriched shrimp pond sediment microbial community

Chuanyin Liu, Jingjing Zhang, [ ... ], Xinyu Wang

Uncovering the molecular landscape of young-onset diffuse gastric cancer: A relieff-based feature selection analysis on RNA-Seq data

Zahra Khalili Azni, Matia Sadat Borhani, [ ... ], Maryam Pasandideh Arjmand

Integrated transcriptomic analysis of LMB2-induced podocyte injury identifies conserved inflammatory and adaptive stress responses

Mohammad-Reza Esmaeili, Marjan Nejati, [ ... ], Sara Taleahmad

What topological and geometric structure do biological foundation models learn? Evidence from 141 hypotheses

Ihor Kendiukhov

Dysregulated glucocorticoid-responsive immune genes in peripheral blood mononuclear cells as a shared molecular signature of autism spectrum disorder and irritable bowel syndrome

Kuo Zhang, Fangfang Mou, Jing Liu, Jianzhong Wang

The role of SALL1-MGST1 axis-mediated ferroptosis inhibition in chemoresistance of retinoblastoma

Zhuang Xiong, Weiwei Zhang, [ ... ], Xue Zhang

Genetic regulatory axis between AGR2 and ESR1 promotes breast cancer progression

M. Aiman Mohtar, Delphine Fessart, [ ... ], Ted Hupp

RAGER: A user-friendly computational platform for integrated analysis of RNA-Seq and ATAC-seq data

Yunjie Liu, Yijia Liu, [ ... ], Lu Lu

Molecular and structural reprogramming of gastric cancer revealed by systems-level transcriptomic analysis

Negar Mottaghi-Dastjerdi, Mohammad Soltany-Rezaee-Rad

Unraveling the role of ChREBP in lung adenocarcinoma: Expression, regulatory networks, and potential functional impact

Athisake Ruangpracha, Chanachai Sae-Lee, [ ... ], Naravat Poungvarin

Single-cell atlas of gastric cancer reveals malignant epithelial evolution and regulatory reprogramming of the tumor microenvironment

Xiulan Li, Mengqi Guo, Yunhan Wen, Bo Long

FOXO1 transcription factor modulates airway epithelial responses to viral infection

Nadia M. Daniel, Ritu Mann-Nüttel, [ ... ], Harissios Vliagoftis

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