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Sequencing techniques

Consecutive deletions in a unique Uruguayan SARS-CoV-2 lineage evidence the genetic variability potential of accessory genes

Yanina Panzera, Lucía Calleros, Natalia Goñi, Ana Marandino, Claudia Techera, Sofía Grecco, Natalia Ramos, Sandra Frabasile, Gonzalo Tomás, Emma Condon, María Noel Cortinas, Viviana Ramas, Leticia Coppola, Cecilia Sorhouet, Cristina Mogdasy, Héctor Chiparelli, Juan Arbiza, Adriana Delfraro, Ruben Pérez

published 17 Feb 2022

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Cryptic MYC insertions in Burkitt lymphoma: New data and a review of the literature

Renata Woroniecka, Grzegorz Rymkiewicz, Lukasz M. Szafron, Katarzyna Blachnio, Laura A. Szafron, Zbigniew Bystydzienski, Barbara Pienkowska-Grela, Klaudia Borkowska, Jolanta Rygier, Aleksandra Kotyl, Natalia Malawska, Katarzyna Wojtkowska, Joanna Parada, Anita Borysiuk, Victor Murcia Pienkowski, Malgorzata Rydzanicz, Beata Grygalewicz

published 15 Feb 2022

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Tracking ebolavirus genomic drift with a resequencing microarray

Irina Tiper, Moussa Kourout, Bryan Lanning, Carolyn Fisher, Krishnamurthy Konduru, Anjan Purkayastha, Gerardo Kaplan, Robert Duncan

published 10 Feb 2022

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Predicted 3D model of the M protein of Porcine Epidemic Diarrhea Virus and analysis of its immunogenic potential

Alan Rodríguez-Enríquez, Irma Herrera-Camacho, Lourdes Millán-Pérez-Peña, Julio Reyes-Leyva, Gerardo Santos-López, José Francisco Rivera-Benítez, Nora Hilda Rosas-Murrieta

published 09 Feb 2022

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Sequencing SARS-CoV-2 from antigen tests

Ashley Nazario-Toole, Holly M. Nguyen, Hui Xia, Dianne N. Frankel, John W. Kieffer, Thomas F. Gibbons

published 08 Feb 2022

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Development of an efficient antimicrobial susceptibility testing method with species identification by Nanopore sequencing of 16S rRNA amplicons

Yuto Kawai, Naoya Ozawa, Takako Fukuda, Noriyuki Suzuki, Kazuki Mikata

published 03 Feb 2022

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Computational prediction of intracellular targets of wild-type or mutant vesicular stomatitis matrix protein

Matthew C. Morris, Thomas M. Russell, Cole A. Lyman, Wesley K. Wong, Gordon Broderick, Maureen C. Ferran

published 02 Feb 2022

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Comparison of seven SNP calling pipelines for the next-generation sequencing data of chickens

Jing Liu, Qingmiao Shen, Haigang Bao

published 31 Jan 2022

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Identification of pharmacogenetic variants from large scale next generation sequencing data in the Saudi population

Ewa Goljan, Mohammed Abouelhoda, Mohamed M. ElKalioby, Amjad Jabaan, Nada Alghithi, Brian F. Meyer, Dorota Monies

published 28 Jan 2022

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Recursive splicing is a rare event in the mouse brain

Sohyun Moon, Ying-Tao Zhao

published 28 Jan 2022

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Impact of high platelet turnover on the platelet transcriptome: Results from platelet RNA-sequencing in patients with sepsis

Thomas G. Nührenberg, Jasmin Stöckle, Federico Marini, Mark Zurek, Björn A. Grüning, Vladimir Benes, Lutz Hein, Franz-Josef Neumann, Christian Stratz, Marco Cederqvist, Willibald Hochholzer

published 27 Jan 2022

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ASPICov: An automated pipeline for identification of SARS-Cov2 nucleotidic variants

Valentin Tilloy, Pierre Cuzin, Laura Leroi, Emilie Guérin, Patrick Durand, Sophie Alain

published 26 Jan 2022

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RNA Sequencing in COVID-19 patients identifies neutrophil activation biomarkers as a promising diagnostic platform for infections

Richard Wargodsky, Philip Dela Cruz, John LaFleur, David Yamane, Justin Sungmin Kim, Ivy Benjenk, Eric Heinz, Obinna Ome Irondi, Katherine Farrar, Ian Toma, Tristan Jordan, Jennifer Goldman, Timothy A. McCaffrey

published 26 Jan 2022

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