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Sequencing techniques

Exome sequencing identifies novel variants associated with non-syndromic hearing loss in the Iranian population

Jalal Vallian Broojeni, Arezu Kazemi, Halimeh Rezaei, Sadeq Vallian

published 10 Aug 2023

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Staphylococcus aureus isolates from children with clinically differentiated osteomyelitis exhibit distinct transcriptomic signatures

Ahmad A. Hachem, Laura M. Filkins, Yared H. Kidane, Prithvi Raj, Naureen G. Tareen, Carlos A. Arana, Gowrishankar Muthukrishnan, Lawson A. Copley

published 10 Aug 2023

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Nuclear DNA segments homologous to mitochondrial DNA are obstacles for detecting heteroplasmy in sugar beet (Beta vulgaris L.)

Eigo Taniguchi, Kosuke Satoh, Megumi Ohkubo, Sachiyo Ue, Hiroaki Matsuhira, Yosuke Kuroda, Tomohiko Kubo, Kazuyoshi Kitazaki

published 08 Aug 2023

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Two opposing gene expression patterns within ATRX aberrant neuroblastoma

Michael R. van Gerven, Linda Schild, Jennemiek van Arkel, Bianca Koopmans, Luuk A. Broeils, Loes A. M. Meijs, Romy van Oosterhout, Max M. van Noesel, Jan Koster, Sander R. van Hooff, Jan J. Molenaar, Marlinde L. van den Boogaard

published 04 Aug 2023

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Evaluation of an optimized germline exomes pipeline using BWA-MEM2 and Dragen-GATK tools

Nofe Alganmi, Heba Abusamra

published 03 Aug 2023

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Improving prediction of drug-target interactions based on fusing multiple features with data balancing and feature selection techniques

Hakimeh Khojasteh, Jamshid Pirgazi, Ali Ghanbari Sorkhi

published 03 Aug 2023

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Periostin—An inducer of pro-fibrotic phenotype in monocytes and monocyte-derived macrophages in systemic sclerosis

Mao Suzuki, Yasushi Ototake, Asami Akita, Miho Asami, Noriko Ikeda, Tomoya Watanabe, Miwa Kanaoka, Yukie Yamaguchi

published 02 Aug 2023

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Novel anti-PTEN C2 domain monoclonal antibodies to analyse the expression and function of PTEN isoform variants

Leire Torices, Caroline E. Nunes-Xavier, José I. López, Rafael Pulido

published 01 Aug 2023

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High throughput isolation of RNA from single-cells within an intact tissue for spatial and temporal sequencing a reality

John Stanley, Akshar Lohith, Lucca Debiaso, Kevan Wang, Minh Ton, Wenwu Cui, Weiwei Gu, Aihua Fu, Nader Pourmand

published 01 Aug 2023

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An image-guided microfluidic system for single-cell lineage tracking

Mahmut Aslan Kamil, Camille Fourneaux, Alperen Yilmaz, Stavrakis Stavros, Romuald Parmentier, Andras Paldi, Sandrine Gonin-Giraud, Andrew J. deMello, Olivier Gandrillon

published 01 Aug 2023

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Scikick: A sidekick for workflow clarity and reproducibility during extensive data analysis

Matthew Carlucci, Tadas Bareikis, Karolis Koncevičius, Povilas Gibas, Algimantas Kriščiūnas, Art Petronis, Gabriel Oh

published 27 Jul 2023

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Haplotype-level metabarcoding of freshwater macroinvertebrate species: A prospective tool for population genetic analysis

Joeselle M. Serrana, Kozo Watanabe

published 24 Jul 2023

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Severe udder cleft dermatitis lesion transcriptomics points to an impaired skin barrier, defective wound repair and a dysregulated inflammatory response as key elements in the pathogenesis

A. S. Vermeersch, M. Ali, Y. Gansemans, F. Van Nieuwerburgh, P. Geldhof, R. Ducatelle, D. Deforce, J. Callens, G. Opsomer

published 24 Jul 2023

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