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Sequence analysis

Rapid Annotation of Anonymous Sequences from Genome Projects Using Semantic Similarities and a Weighting Scheme in Gene Ontology

Paolo Fontana, Alessandro Cestaro, [ ... ], Stefano Toppo

Transcription Factor Binding Sites Are Genetic Determinants of Retroviral Integration in the Human Genome

Barbara Felice, Claudia Cattoglio, [ ... ], Fulvio Mavilio

Are Protein Domains Modules of Lateral Genetic Transfer?

Cheong Xin Chan, Aaron E. Darling, Robert G. Beiko, Mark A. Ragan

Two Chromogranin A-Derived Peptides Induce Calcium Entry in Human Neutrophils by Calmodulin-Regulated Calcium Independent Phospholipase A₂

Dan Zhang, Peiman Shooshtarizadeh, [ ... ], Marie-Hélène Metz-Boutigue

Evidence for Co-Evolution between Human MicroRNAs and Alu-Repeats

Stefan Lehnert, Peter Van Loo, [ ... ], Frans C. Schuit

Improved Disorder Prediction by Combination of Orthogonal Approaches

Avner Schlessinger, Marco Punta, [ ... ], Burkhard Rost

Genome-Wide Analyses of Recombination Prone Regions Predict Role of DNA Structural Motif in Recombination

Prithvi Mani, Vinod Kumar Yadav, Swapan Kumar Das, Shantanu Chowdhury

The Tree versus the Forest: The Fungal Tree of Life and the Topological Diversity within the Yeast Phylome

Marina Marcet-Houben, Toni Gabaldón

Using Sequence Similarity Networks for Visualization of Relationships Across Diverse Protein Superfamilies

Holly J. Atkinson, John H. Morris, Thomas E. Ferrin, Patricia C. Babbitt

Consistency Analysis of Redundant Probe Sets on Affymetrix Three-Prime Expression Arrays and Applications to Differential mRNA Processing

Xiangqin Cui, Ann E. Loraine

Novel Exon of Mammalian ADAR2 Extends Open Reading Frame

Stefan Maas, Willemijn M. Gommans

Structural Model of the Rev Regulatory Protein from Equine Infectious Anemia Virus

Yungok Ihm, Wendy O. Sparks, [ ... ], Drena Dobbs

Direct Inhibition of GSK3β by the Phosphorylated Cytoplasmic Domain of LRP6 in Wnt/β-Catenin Signaling

Shunfu Piao, Sun-Hye Lee, [ ... ], Nam-Chul Ha

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