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Bioinformatics

Exome-based cancer driver gene comprehensive testing can provide a genetic diagnosis for individuals with triple-negative breast cancer

Daniel Alzate, Angel Yobany Sánchez, [ ... ], Carlos A. Parra-López

FusionPHI: A phage-host interaction prediction network model based on attention-driven multi-modal feature fusion

Xiangjun Li, Ruitao Li, Zhui Tu, Qingting Wei

Haplotypes across the Oceans: worldwide phylogeography, evolution, conservation and nomenclature standardization in the leatherback sea turtle (Dermochelys coriacea)

Wesley D. Colombo, Sarah de S. A. Teodoro, [ ... ], Sarah M. Vargas

Accurate quantification of spliced and unspliced transcripts for single-cell RNA sequencing with tidesurf

Jan T. Schleicher, Doreen Klingler, Manfred Claassen

Assessing fish diversity in the Amazon: The impact of primers and reference libraries in eDNA surveys

Shizuka Hashimoto, Sarah V. Carvalho, [ ... ], Tomas Hrbek

F-squares over cellular automata

Joanne Hall, Kerri Morgan, Stella Stylianou, Vindya Warnakulasooriyage

Rapid and consistent genetic clustering of environmental Legionella pneumophila isolates using accessible single-step WGS analysis tools

Hanno Schmidt, Sven-Ernö Bikár, [ ... ], Wolfgang Kohnen

A course-undergraduate research experience (CURE) to explore the effect of structural variants on gene expression in C. elegans balancers

Tatiana Maroilley, Victoria Rodrigues Alves Barbosa, [ ... ], Maja Tarailo-Graovac

Bridging clinical and computational assessments: Standardizing kinematic reporting in modified mallet scale movements

Ali İmran Yalçın, Oğuz Faik Seven, [ ... ], Tüzün Fırat

ProteoMapper: Alignment-aware identification and quantitative analysis of contextual motif–domain patterns in protein families

Sifullah Mahmud Sefa, Joyeeta Sarkar, Arif Hasan Khan Robin, Machbah Uddin

Efficient fine-tuning of large-scale vision-language models for visual marketing analysis: From brand logo detection to aesthetic preference prediction

Suxiang Qin, Songwen Wei

SEGUID v2: Extending SEGUID checksums for circular, linear, single- and double-stranded biological sequences

Humberto Pereira, Paulo César Silva, [ ... ], Björn Johansson

Structural analysis of recombinant AAV vector genomes at single-molecule resolution

David Rouleau, Dimpal Lata, [ ... ], Ifeyinwa Iwuchukwu

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