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Protein structure prediction

Prediction of pre- and postfusion conformations of class I fusion proteins with AlphaFold2

Sevilay Gülesen, Victoria Most, Clara T. Schoeder, Jens Meiler

Structural bioinformatic studies of eight integral transmembrane NADPH oxidases and their AlphaFold 3 predicted QTY analogs with reduced hydrophobicity

Tutu Hu, Rick Cheng, Edward Chen, Shuguang Zhang

Predicting unknown binding sites for transition-metal-based compounds in proteins

Andrea Levy, Ursula Rothlisberger

In silico pharmacological analysis of Tinospora cordifolia compounds targeting African swine fever virus B175L

Kasuni Karunarathne, Saumya Poorni, [ ... ], Lakmal Ranathunga

System immunoinformatics–based design of a multi-epitope vaccine candidate against La Crosse virus

Md. Habib Ullah Masum, Homaira Pervin Heema, [ ... ], Mohammad Sharif Uddin

Decoding the genetic basis of demyelination: Prediction of potential pathogenic coding and regulatory noncoding MBP SNPs in multiple sclerosis

Arwa Ibrahim Alwabran, Ghalia Mahfod Aldoseri, [ ... ], Ebtihal Kamal

Cancer mutations in RAD51 and its paralogues

Anna L. Valentine, Isabella L. Huth, [ ... ], Ruben C. Petreaca

Extracellular activity of a bacterial protease associated with reduced phage infectivity

Ehud Herbst, Gael Rosen Blechman, [ ... ], Rotem Sorek

Phosphorylation landscape of dengue virus proteins and their implications in protein-protein interactions

Prakhar Agrawal, Rahul Yadav, Arumugam Madhumalar, Ganesan Senthil Kumar

Design and in silico evaluation of an mRNA vaccine against HTLV-1 using AI-driven reverse vaccinology approaches

Nadia Seifi, Navid Nezafat, Mohammad Soroosh Hajizade, Manica Negahdaripour

Effect of HIV-1 subtype-specific Tat protein polymorphisms on Tat-TAR interaction

Alnara Zhamalbekova, Mahmoud A. A. Ibrahim, Peter A. Sidhom, Syed Hani Abidi

Identification of neuronatin as a SERCA2b regulin-like protein and assessment of its aggregation propensity via coarse grained simulations

Omar Ben Mariem, Lara Coppi, [ ... ], Maurizio Crestani

Computational prediction of binding affinity and structural impact of three Pakistani SARS-CoV-2 spike RBD variants on human ACE2 interaction

Muhammad Usama, Muhammad Azeem, Ghulam Mustafa

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