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Protein structure comparison

Sequence Alignment Reveals Possible MAPK Docking Motifs on HIV Proteins

Perry Evans, Ahmet Sacan, Lyle Ungar, Aydin Tozeren

Sequence and Structural Analysis of the Chitinase Insertion Domain Reveals Two Conserved Motifs Involved in Chitin-Binding

Hai Li, Lesley H. Greene

Structural and Functional Roles of Coevolved Sites in Proteins

Saikat Chakrabarti, Anna R. Panchenko

The WD40 Domain Is Required for LRRK2 Neurotoxicity

Nathan D. Jorgensen, Yong Peng, [ ... ], William T. Dauer

Effective Identification of Conserved Pathways in Biological Networks Using Hidden Markov Models

Xiaoning Qian, Byung-Jun Yoon

A Statistical Model of Protein Sequence Similarity and Function Similarity Reveals Overly-Specific Function Predictions

Brenton Louie, Roger Higdon, Eugene Kolker

Revisiting the Myths of Protein Interior: Studying Proteins with Mass-Fractal Hydrophobicity-Fractal and Polarizability-Fractal Dimensions

Anirban Banerji, Indira Ghosh

Direct Repeat 6 from Human Herpesvirus-6B Encodes a Nuclear Protein that Forms a Complex with the Viral DNA Processivity Factor p41

Mariane H. Schleimann, Janni M. L. Møller, Emil Kofod-Olsen, Per Höllsberg

Structural and Functional Similarity between the Bacterial Type III Secretion System Needle Protein PrgI and the Eukaryotic Apoptosis Bcl-2 Proteins

Matthew D. Shortridge, Robert Powers

Evolutionary Descent of Prion Genes from the ZIP Family of Metal Ion Transporters

Gerold Schmitt-Ulms, Sepehr Ehsani, [ ... ], Holger Wille

Highly Sensitive Detection of Individual HEAT and ARM Repeats with HHpred and COACH

Fred Kippert, Dietlind L. Gerloff

Solution Structure and Phylogenetics of Prod1, a Member of the Three-Finger Protein Superfamily Implicated in Salamander Limb Regeneration

Acely Garza-Garcia, Richard Harris, [ ... ], Paul C. Driscoll

Prodepth: Predict Residue Depth by Support Vector Regression Approach from Protein Sequences Only

Jiangning Song, Hao Tan, [ ... ], James C. Whisstock

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