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Protein structure comparison

Local Alignment Refinement Using Structural Assessment

Pierre Chodanowski, Aurélien Grosdidier, Ernest Feytmans, Olivier Michielin

High-Resolution 3D Structure Determination of Kaliotoxin by Solid-State NMR Spectroscopy

Jegannath Korukottu, Robert Schneider, [ ... ], Markus Zweckstetter

SP⁵: Improving Protein Fold Recognition by Using Torsion Angle Profiles and Profile-Based Gap Penalty Model

Wei Zhang, Song Liu, Yaoqi Zhou

Stylus: A System for Evolutionary Experimentation Based on a Protein/Proteome Model with Non-Arbitrary Functional Constraints

Douglas D. Axe, Brendan W. Dixon, Philip Lu

The Nod-Like Receptor (NLR) Family: A Tale of Similarities and Differences

Martina Proell, Stefan J. Riedl, [ ... ], Robert Schwarzenbacher

Nature of Protein Family Signatures: Insights from Singular Value Analysis of Position-Specific Scoring Matrices

Akira R. Kinjo, Haruki Nakamura

Alignment of Non-Covalent Interactions at Protein-Protein Interfaces

Hongbo Zhu, Ingolf Sommer, Thomas Lengauer, Francisco S. Domingues

Distinguishing Molecular Features and Clinical Characteristics of a Putative New Rhinovirus Species, Human Rhinovirus C (HRV C)

Peter McErlean, Laura A. Shackelton, [ ... ], Ian M. Mackay

Homology Modeling of Dissimilatory APS Reductases (AprBA) of Sulfur-Oxidizing and Sulfate-Reducing Prokaryotes

Birte Meyer, Jan Kuever

Conservation, Variability and the Modeling of Active Protein Kinases

James D. R. Knight, Bin Qian, David Baker, Rashmi Kothary

Early Evolution of Ionotropic GABA Receptors and Selective Regimes Acting on the Mammalian-Specific Theta and Epsilon Subunits

Christopher J. Martyniuk, Stéphane Aris-Brosou, [ ... ], Vance L. Trudeau

A Framework for Exploring Functional Variability in Olfactory Receptor Genes

Orna Man, David C. Willhite, [ ... ], Yoav Gilad

HIV-Specific Probabilistic Models of Protein Evolution

David C. Nickle, Laura Heath, [ ... ], Sergei L. Kosakovsky Pond

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