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Microbial genomics

Microbiome analysis of bronchoalveolar lavage (BAL) specimens from immunocompromised patients with pneumonia compared to those from healthy volunteers

Zareen Fatima, Matthew D. Surette, Sarah Marttala, Daniela Leto, Padman Jayaratne, Fiona Smaill, Marek Smieja, Mohammad Rubayet Hasan

published 10 Jun 2026

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RNA metagenomic profiling of mosquito viromes associated with Vector-Borne diseases in Quebec, Canada

Ines Levade, Benjamin Delisle, Éric Fournier, Christian Therrien

published 05 Jun 2026

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Phage-plasmid-like elements are found throughout diverse environments and encode niche-specific functional traits

James I. Mullet, Liqing Zhang, Amy Pruden, Connor L. Brown

published 29 May 2026

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Virological investigation and comparative genomic analysis of elephant endotheliotropic herpesvirus 1B infection in an Australian captive herd of Asian elephants (Elephas maximus)

Jack W. Wheelahan, Paola K. Vaz, Alistair R. Legione, Carol A. Hartley, Natalie L. Rourke, Michael Lynch, Bonnie McMeekin, Elizabeth C. Dobson, Joanne M. Devlin

published 29 May 2026

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Genomic and functional characterization of a novel halophilic bacteriophage targeting carbapenem-resistant Klebsiella pneumoniae

Sahar Abed, Masoumeh Beig, Sepideh Soltani, Mohadeseh Pahlevani, Peter Speck, Morvarid Shafiei, Abdolrazagh Hashemi Shahraki, Abozar Ghorbani

published 28 May 2026

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Effects of taurine supplementation on metabolic health and biological aging in healthcare workers: A protocol for a triple-blinded, Bayesian-optimized phase II randomized controlled trial

Mandy H. M. Chu, Jacky K. M. Lai, Anna Lee, William K. K. Wu, Ziheng Huang, Henry M. K. Wong, Laptin Ho, Hao Su, Samantha S. M. Ho, Xinbo Xu, Warren Pavey, David J. R. Morgan, Matthew T. V. Chan, Kwok M. Ho

published 27 May 2026

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Histological and metagenomic analysis of microbial communities in archaeological human bones

Damla Kaptan, Anne Cecilie Flemming Elvers, Anna Kjær Knudsen, Hannes Schroeder, Hege Ingjerd Hollund

published 27 May 2026

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Machine learning reveals microbiome differences by periodontitis severity

Soo Hyun Seo, Jae Won Lee, Sujin Oh, Jin-Sil Hong, Ban Seok Lee, Sun Jae Kwon, Keun-Suh Kim, Jung Soo Park, Ju Sun Heo, Ki Hoon Ahn, Hyo‐Jung Lee, Kyoung Un Park

published 21 May 2026

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An entropy-based framework for genomic variability analysis: A South American case study of human papillomavirus

Alan López Leal, Elizabeth Valdés-Muñoz, Jorge Y. Faundez-Acuña, Víctor Rojas-Pérez, Vivían D´ Afonseca, Fabián Silva-Aravena

published 15 May 2026

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A novel isolated phage targeting Pseudomonas aeruginosa demonstrates therapeutic potential

Xinjie Wang, Zhao Zhang, Emanuela Garbarino, Shuhua Chen, Genyan Liu, Huamin Tang, Hua Xie

published 13 May 2026

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Effects of pica practice on oral bacteriome and mycobiome profiles among pregnant women: A comparative study

Brenda A. Z. Abu, Lanxin Zhang, Robert Beblavy, Yan Wu, Xingyi Lu, Kevin Fiscella, Michael B. Sohn, Jin Xiao

published 08 May 2026

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Non-concussive head impacts sustained during American football correlate with changes in gut microbiome diversity and composition

Zachary J. Pelland, Aziz Zafar, Ahmet A. Ay, Kenneth Douglas Belanger

published 06 May 2026

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Streptococcus didelphis infection in free-ranging white-eared opossum (Didelphis albiventris) and Brazilian common opossum (Didelphis aurita): pathology, microbiologic, and genomic characterization

Daniel Oliveira dos Santos, Yasmin Gonçalves de Castro, André Duarte Vieira, Bruna Hermine de Campos, Lucas dos Reis de Souza, Nayara Ferreira de Paula, Vasco Azevedo, Bertram Brenig, Caio de Castro Cunha Figueiredo, Letícia Neves Ribeiro, Janaína Ribeiro Duarte, Vinícius Henrique Barbosa Amaral, Carlyle Mendes Coelho, Herlandes Penha Tinoco, Marcelo Pires Nogueira Carvalho, Ayisa Rodrigues de Oliveira, Rodrigo Otávio Silveira Silva, Renato Lima Santos

published 30 Apr 2026

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