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Microbial genomics

Sex differences in the effects of shift work-like schedules on gut microbiome and intestinal barrier in relation to stroke survival

Ella Barnum, Jonathan L. Turck, Karienn A. Souza, Kathiresh Kumar Mani, Rachel Pilla, Amutha Selvamani, Farida Sohrabji, David J. Earnest

published 14 Aug 2026

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MyD88 restricts dysbiosis-mediated inflammation in filaggrin deficient skin

Meng-Jen Wu, Advaitaa Ravipati, Yu Wang, Laine E. Feller, Alyssa Chu, Rishi Damarla, Zhiyang Li, Lam C. Tsoi, Ryleigh Griffin, Peng Hou, Hai Liang, Raif Geha, Julia A. Segre, Heidi H. Kong, Johann E. Gudjonsson, Nathan K. Archer

published 14 Aug 2026

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Study protocol: Effect of inulin supplementation on gut microbiota in patients with oral lichen planus — A double-blind, randomised, placebo-controlled parallel-group trial

Koki Nambu, Naoki Kaneko, Shiho Yokomizo, Hu Chen, Lijing Yan, Wang Shiyao, Ryusei Shizuma, Eiji Iwata, Yukiko Ohyama, Shohei Akagawa, Soichiro Ibaragi, Shintaro Kawano, Masafumi Moriyama

published 13 Aug 2026

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CLR-Seq: A pipeline to identify bacterial microbiota species with immune-relevant glycan moieties through human C-type lectin receptor interaction

Jasper Mol, Rob van Dalen, Yvonne Pannekoek, Malgorzata E. Mnich, Marcel R. de Zoete, Mark Davids, Hilde Herrema, Nina M. van Sorge

published 13 Aug 2026

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Effect of reused litter on early cecal microbiota succession and the immune cells distribution in layer chickens

Nimra Khalid, Shuja Majeed, Bikas Raj Shah, Ali Nazmi

published 12 Aug 2026

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DELTA: Strengthening human biological resilience with an N=1 digital health and dynamic biomarker protocol

Peter Wang, Nigel Foo, Chengxun Su, Nicole Yong Ting Leung, Shang Wei Song, Gyula Seres, Yoann Sapanel, Lissa Hooi, Avelle Wong, Yoong Hun Ong, Poonam Rai, Hyunjin Park, Han Shi Jocelyn Chew, Laureen Yi Ting Wang, Jonathan Wei Jie Lee, Xavier Tadeo, Dean Ho

published 12 Aug 2026

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Development of a rapid comQ-targeted quantitative polymerase chain reaction assay for specific identification and quantification of Bacillus subtilis subsp. natto

Mayu Takizawa, Daisuke Kyoui, Rika Horiguchi, Ayano Sakurai, Taketo Kawarai, Naoki Narisawa

published 03 Aug 2026

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Bacterial vaginosis in early pregnancy and birth outcomes: Evidence from a prospective cohort in the middle belt of Ghana

Dennis Gyasi Konadu, Alex Kwame Owusu-Ofori, David Kwame Dosoo, Zuwera Yidana, Gladys Matuamo Ngo, Philomina Nkansah Nfum, Richard Joshua Tetteh, Dennis Adu-Gyasi, Kwaku Poku-Asante

published 31 Jul 2026

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Longitudinal omics study of transcriptional dynamics in Lactobacillus crispatus

SiLing Ren, Huimin Jiang, Xiaohua Liu, Daju Zhou, Liping Liu, Lan Wang, Yi Lan, Yi Xiao, Liangdan Tang

published 30 Jul 2026

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Herpes simplex virus detection and genomes from under-sampled, remote populations

Christopher D. Bowen, Alexandre Blake, Daniel W. Renner, Mary Ashley Hazel, John Jakurama, Justy Matundu, Moriah L. Szpara, Nita Bharti

published 24 Jul 2026

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Characterisation of the bacterial and archaeal microbiota in processed colostrum collected from a spring-calving dairy herd

Sabine Scully, Bernadette Earley, Paul E. Smith, Matthew S. J. Finnie, Catherine McAloon, David A. Kenny, Sinéad M. Waters

published 22 Jul 2026

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Distinct gut and oral microbiome patterns associated with dyslexia in a family-based cohort: A preliminary exploratory study

Sterling L. Wright, Mia Joslin, Yookyung Kim, Magdalena Olson, Ayden Hall, Beate Peter, Corrie M. Whisner

published 21 Jul 2026

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The oral and lower airway microbiota and coronary heart disease in COPD patients and controls

Christina Due Svendsen, Rune Nielsen, Terje H. Larsen, Karel K. J. Kuiper, Tomas M. Eagan

published 16 Jul 2026

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