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Microbial genomics

Evolution in Quantum Leaps: Multiple Combinatorial Transfers of HPI and Other Genetic Modules in Enterobacteriaceae

Armand Paauw, Maurine A. Leverstein-van Hall, Jan Verhoef, Ad C. Fluit

published 13 Jan 2010

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The First Bite— Profiling the Predatosome in the Bacterial Pathogen Bdellovibrio

Carey Lambert, Chien-Yi Chang, Michael J. Capeness, R. Elizabeth Sockett

published 06 Jan 2010

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The Effects of Circumcision on the Penis Microbiome

Lance B. Price, Cindy M. Liu, Kristine E. Johnson, Maliha Aziz, Matthew K. Lau, Jolene Bowers, Jacques Ravel, Paul S. Keim, David Serwadda, Maria J. Wawer, Ronald H. Gray

published 06 Jan 2010

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Proteomic Detection of Non-Annotated Protein-Coding Genes in Pseudomonas fluorescens Pf0-1

Wook Kim, Mark W. Silby, Sam O. Purvine, Julie S. Nicoll, Kim K. Hixson, Matt Monroe, Carrie D. Nicora, Mary S. Lipton, Stuart B. Levy

published 24 Dec 2009

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High Throughput Sequencing and Proteomics to Identify Immunogenic Proteins of a New Pathogen: The Dirty Genome Approach

Gilbert Greub, Carole Kebbi-Beghdadi, Claire Bertelli, François Collyn, Beat M. Riederer, Camille Yersin, Antony Croxatto, Didier Raoult

published 23 Dec 2009

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Pebble and Rock Band: Heuristic Resolution of Repeats and Scaffolding in the Velvet Short-Read de Novo Assembler

Daniel R. Zerbino, Gayle K. McEwen, Elliott H. Margulies, Ewan Birney

published 22 Dec 2009

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Antigen Diversity in the Parasitic Bacterium Anaplasma phagocytophilum Arises from Selectively-Represented, Spatially Clustered Functional Pseudogenes

Janet E. Foley, Nathan C. Nieto, Anthony Barbet, Patrick Foley

published 15 Dec 2009

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Red-Mediated Transposition and Final Release of the Mini-F Vector of a Cloned Infectious Herpesvirus Genome

Felix Wussow, Helmut Fickenscher, B. Karsten Tischer

published 04 Dec 2009

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Examination of Genome Homogeneity in Prokaryotes Using Genomic Signatures

Jon Bohlin, Eystein Skjerve

published 02 Dec 2009

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The Association of Virulence Factors with Genomic Islands

Shannan J. Ho Sui, Amber Fedynak, William W. L. Hsiao, Morgan G. I. Langille, Fiona S. L. Brinkman

published 01 Dec 2009

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Gene Context Analysis in the Integrated Microbial Genomes (IMG) Data Management System

Konstantinos Mavromatis, Ken Chu, Natalia Ivanova, Sean D. Hooper, Victor M. Markowitz, Nikos C. Kyrpides

published 24 Nov 2009

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Genome Sequence of the Versatile Fish Pathogen Edwardsiella tarda Provides Insights into its Adaptation to Broad Host Ranges and Intracellular Niches

Qiyao Wang, Minjun Yang, Jingfan Xiao, Haizhen Wu, Xin Wang, Yuanzhi Lv, Lili Xu, Huajun Zheng, Shengyue Wang, Guoping Zhao, Qin Liu, Yuanxing Zhang

published 29 Oct 2009

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Accurate Strand-Specific Quantification of Viral RNA

Nicole E. Plaskon, Zach N. Adelman, Kevin M. Myles

published 22 Oct 2009

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