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Metagenomics

Comparative analysis of gut microbiome alterations in early- and late-onset preeclampsia: A case control study

Sofie Meijer, Luisa W. Hugerth, Mehrnaz Nouri, Lena Erlandsson, Shahram Lavasani, Stefan R. Hansson

published 18 Jun 2026

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Study protocol on antimicrobial resistance burden, transmission dynamics, and therapeutic bacteriophages in livestock and exposed farming populations in Nagpur, India: An integrated One Health approach

Amit R. Nayak, Jayshree Shukla, Sushrut Kulkarni, Rima Biswas, Nitin Kurkure, Megha Kaore, Sandeep Chaudhari, Urmi Bajpai, Krishnamurthi Kannan, SaravanaDevi Sivanesan, Sadanand D. Sontakke, Aliabbas Husain, Pankaj M. Kulurkar, Amit Bafna, Rajpal Singh Kashyap

published 16 Jun 2026

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RNA metagenomic profiling of mosquito viromes associated with Vector-Borne diseases in Quebec, Canada

Ines Levade, Benjamin Delisle, Éric Fournier, Christian Therrien

published 05 Jun 2026

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ViralMultiNet: A structure-aware multimodal framework for viral protein function prediction in wastewater surveillance

FuGuo Liu, TingLian Lai, WenXia Xu, GuoDong Li

published 03 Jun 2026

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Histological and metagenomic analysis of microbial communities in archaeological human bones

Damla Kaptan, Anne Cecilie Flemming Elvers, Anna Kjær Knudsen, Hannes Schroeder, Hege Ingjerd Hollund

published 27 May 2026

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Metagenomic and taxonomic profiling of phyllosphere bacteria from Mangifera indica in response to urban air pollutants in Medellín, Colombia

Natalia Bernal Hernández, Héctor Alejandro Rodríguez Cabal, Nancy J. Pino, Sara Ramírez Restrepo, Luisa María Múnera Porras

published 28 Apr 2026

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Predicted meta-omics: A potential solution to multi-omics data scarcity in microbiome studies

Bianca-Maria Cosma, Stephanie Pillay, David Calderón-Franco, Thomas Abeel

published 10 Apr 2026

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Molecular identification and microbiome profiling of household casebearer, Phereoeca sp. (Lepidoptera: Tineidae) from Malaysia: Potential implications for human skin irritation

Salmah Yaakop, Muhammad Afiq Senen, Nur Alya Adila Rosli, Muhamad Azmi Mohammed

published 09 Apr 2026

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Comparative fecal microbiome analysis of the endangered Volcano rabbit (Romerolagus diazi) reveals a microbial core in contrasting habitats of Central Mexico

Leslie M. Montes-Carreto, Hanya D. Arellano-Hernández, José Antonio Guerrero, Esperanza Martinez-Romero

published 26 Mar 2026

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New insights into the feeding behaviour of the Japanese squid Todarodes pacificus paralarvae, and a combined analysis of metagenome and amino acid isotope ratios

Kohsuke Adachi, Yoshito Chikaraishi, Sinpei Nomura, Naoko Goto-Inoue, Nobuhiro Zaima, Yuki Kuriya, Michihiro Araki, Katsuji Morioka, Takashi Yanagimoto, Mitsuhiro Nakaya, Jun Yamamoto

published 16 Mar 2026

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Colorectal adenoma presence is associated with decreased menaquinone pathway functions in the gut microbiome of patients undergoing routine colonoscopy

Ilona Vilkoite, Ivars Silamiķelis, Jānis Kloviņš, Ivars Tolmanis, Aivars Lejnieks, Elīna Runce, Krista Cēbere, Ksenija Margole, Olga Sjomina, Laila Silamiķele

published 11 Mar 2026

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Shotgun metagenomic profiling reveals Bacillus-dominated bacterial communities in urban rooftop and surface garden soils of Bangladesh

M. Nazmul Hoque, Md. Liton Rana, Md Abu Ahsan Gilman, Pritom Kumar Pramanik, Md. Saiful Islam, Sadia Afrin Punom, Rabith Rahman, Jayedul Hassan, Tofazzal Islam, Srinivasan Ramasamy, Pepijn Schreinemachers, Ricardo Oliva, Md. Tanvir Rahman

published 06 Mar 2026

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Development of a multiplex ddPCR assay for simultaneous absolute quantification of bacterial, fungal, and human DNA

Guohong Huang, Torrey L. Gallagher, Gregory J. Tsongalis, Joel A. Lefferts

published 20 Feb 2026

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