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Metagenomics

Monitoring radiation exposure through skin swab multi-omic profiling

Geraldine Vitry, Jerry Angdisen, Pauline Arriaga, Shawn Irgen-Gioro, Megan A. Sawant, Daniel C. Vuong, Peter Ilhardt, Jacques Fehr, Bartosz Cwikla, Brian Ponnaiya, Jamie L. Inman, Jian-Hua Mao, Antoine M. Snijders, Shazia Hamid, David Caballero-Lima, Guy Garty, Karyn Apfeldorf, Evagelia C. Laiakis

published 05 Aug 2026

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In silico identification and biophysical characterization of candidate antimicrobial peptides from the Indian marine microbiome targeting multidrug-resistant ESKAPE pathogens

Sreelakshmi K. V, Nasri Thaha, Budheswar Dehury

published 22 Jul 2026

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The effect of different milk pretreatment methods on microbiome community development during Herrgårds cheese production and ripening

Juan Antonio Rodríguez, Luisa Santos-Bay, Apurva Narechania, Christian Carøe, Kimmo Sirén, Sarah S. T. Mak, Ida Broman Nielsen, Max Ramsøe, Thomas S. Pontén, Søren Lillevang, Lene Tranberg Andersen, M. Thomas P. Gilbert

published 14 Jul 2026

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Integrative metagenomics and structural bioinformatics identify explainable gut microbial variants associated with Crohn’s disease

Nadeem Khan, Muhammad Muneeb Nasir, Ubair Aziz, Haseeb Manzoor, Muhammad Faheem Raziq, Zamir Hussain, Ishrat Jabeen, Masood Ur Rehman Kayani

published 10 Jul 2026

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Cloacal microbiome variation in wild and captive Eastern Indigo Snakes (Drymarchon couperi) with and without Cryptosporidium serpentis infection

Christopher Roger Brown, Mark Nikolaus Yacoub, James E. Bogan, Matthew D. Buehler, Michelle Lea Hoffman, Janina Alessandra Krumbeck, Zachary J. Loughman

published 09 Jul 2026

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Comparative analysis of gut microbiome alterations in early- and late-onset preeclampsia: A case control study

Sofie Meijer, Luisa W. Hugerth, Mehrnaz Nouri, Lena Erlandsson, Shahram Lavasani, Stefan R. Hansson

published 18 Jun 2026

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Study protocol on antimicrobial resistance burden, transmission dynamics, and therapeutic bacteriophages in livestock and exposed farming populations in Nagpur, India: An integrated One Health approach

Amit R. Nayak, Jayshree Shukla, Sushrut Kulkarni, Rima Biswas, Nitin Kurkure, Megha Kaore, Sandeep Chaudhari, Urmi Bajpai, Krishnamurthi Kannan, SaravanaDevi Sivanesan, Sadanand D. Sontakke, Aliabbas Husain, Pankaj M. Kulurkar, Amit Bafna, Rajpal Singh Kashyap

published 16 Jun 2026

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RNA metagenomic profiling of mosquito viromes associated with Vector-Borne diseases in Quebec, Canada

Ines Levade, Benjamin Delisle, Éric Fournier, Christian Therrien

published 05 Jun 2026

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ViralMultiNet: A structure-aware multimodal framework for viral protein function prediction in wastewater surveillance

FuGuo Liu, TingLian Lai, WenXia Xu, GuoDong Li

published 03 Jun 2026

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Histological and metagenomic analysis of microbial communities in archaeological human bones

Damla Kaptan, Anne Cecilie Flemming Elvers, Anna Kjær Knudsen, Hannes Schroeder, Hege Ingjerd Hollund

published 27 May 2026

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Metagenomic and taxonomic profiling of phyllosphere bacteria from Mangifera indica in response to urban air pollutants in Medellín, Colombia

Natalia Bernal Hernández, Héctor Alejandro Rodríguez Cabal, Nancy J. Pino, Sara Ramírez Restrepo, Luisa María Múnera Porras

published 28 Apr 2026

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Predicted meta-omics: A potential solution to multi-omics data scarcity in microbiome studies

Bianca-Maria Cosma, Stephanie Pillay, David Calderón-Franco, Thomas Abeel

published 10 Apr 2026

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Molecular identification and microbiome profiling of household casebearer, Phereoeca sp. (Lepidoptera: Tineidae) from Malaysia: Potential implications for human skin irritation

Salmah Yaakop, Muhammad Afiq Senen, Nur Alya Adila Rosli, Muhamad Azmi Mohammed

published 09 Apr 2026

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