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Genome sequencing

Phylodynamics of a regional SARS-CoV-2 rapid spreading event in Colorado in late 2020

Kristen J. Wade, Samantha Tisa, [ ... ], Olivia S. Rissland

Validation of reduced S-gene target performance and failure for rapid surveillance of SARS-CoV-2 variants

Cyndi Clark, Joshua Schrecker, Matthew Hardison, Michael S. Taitel

Rapid genotyping of targeted viral samples using Illumina short-read sequencing data

Alex Váradi, Eszter Kaszab, [ ... ], Levente Laczkó

Histological characterization of anther structure in Tetep-cytoplasmic male sterility and fine mapping of restorer-of-fertility gene in rice

Seung Young Lee, Zhuo Jin, [ ... ], Hee-Jong Koh

ClinPharmSeq: A targeted sequencing panel for clinical pharmacogenetics implementation

Seung-been Lee, Jong-Yeon Shin, [ ... ], Jeong-Sun Seo

Evaluation of high molecular weight DNA extraction methods for long-read sequencing of Shiga toxin-producing Escherichia coli

Sandra Jaudou, Mai-Lan Tran, [ ... ], Sabine Delannoy

Genotype imputation and polygenic score estimation in northwestern Russian population

Nikita Kolosov, Valeriia Rezapova, [ ... ], Mykyta Artomov

Evaluation of a commercial SARS-CoV-2 multiplex PCR genotyping assay for variant identification in resource-scarce settings

Chijioke N. Umunnakwe, Zinhle N. Makatini, [ ... ], Hugo A. Tempelman

MAECI: A pipeline for generating consensus sequence with nanopore sequencing long-read assembly and error correction

Jidong Lang

Comparison of different sequencing techniques for identification of SARS-CoV-2 variants of concern with multiplex real-time PCR

Diyanath Ranasinghe, Tibutius Thanesh Pramanayagam Jayadas, [ ... ], Gathsaurie Neelika Malavige

Spontaneous rate of clonal single nucleotide mutations in Daphnia galeata

Markus Pfenninger, Halina Binde Doria, [ ... ], Mathilde Cordellier

A chromosome-level genome sequence assembly of the red raspberry (Rubus idaeus L.)

Jahn Davik, Dag Røen, [ ... ], Daniel James Sargent

Implementation of a COVID-19 Genomic Surveillance Regional Network for Latin America and Caribbean region

Juliana Almeida Leite, Andrea Vicari, [ ... ], Jairo Mendez-Rico

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