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Genome annotation

Isolation, whole-genome sequencing, and annotation of two antibiotic-producing and antibiotic-resistant bacteria, Pantoea rodasii RIT 836 and Pseudomonas endophytica RIT 838, collected from the environment

Serena Tuytschaevers, Leila Aden, [ ... ], André O. Hudson

Transcriptome sequencing and screening of genes related to the MADS-box gene family in Clematis courtoisii

Mingjian Chen, Linfang Li, [ ... ], Ya Li

Kuura—An automated workflow for analyzing WES and WGS data

Dhanaprakash Jambulingam, Venkat Subramaniam Rathinakannan, [ ... ], Vidal Fey

KIPEs3: Automatic annotation of biosynthesis pathways

Andreas Rempel, Nancy Choudhary, Boas Pucker

Molecular signature to predict quality of life and survival with glioblastoma using Multiview omics model

Rayan Nassani, Yahya Bokhari, Bahauddeen M. Alrfaei

De novo assembly of Iron-Heart Cunninghamia lanceolata transcriptome and EST-SSR marker development for genetic diversity analysis

Sen Liu, Gongxiu He, [ ... ], Can Xiao

A web-based platform for the annotation and analysis of NAR-published databases

Marcel Friedrichs, Cassandra Königs

Genome-based metabolic and phylogenomic analysis of three Terrisporobacter species

Tim Böer, Frank R. Bengelsdorf, [ ... ], Anja Poehlein

Genomic object detection: An improved approach for transposable elements detection and classification using convolutional neural networks

Simon Orozco-Arias, Luis Humberto Lopez-Murillo, [ ... ], Romain Guyot

Comprehensive transcriptomic analysis of long non-coding RNAs in bovine ovarian follicles and early embryos

Pengmin Wang, Éric R. Paquet, Claude Robert

Complete genome assembly of Hawai’i environmental nontuberculous mycobacteria reveals unexpected co-isolation with methylobacteria

Jo Hendrix, L. Elaine Epperson, [ ... ], Michael Strong

Reconciliation and evolution of Penicillium rubens genome-scale metabolic networks–What about specialised metabolism?

Delphine Nègre, Abdelhalim Larhlimi, Samuel Bertrand

Protein embeddings improve phage-host interaction prediction

Mark Edward M. Gonzales, Jennifer C. Ureta, Anish M. S. Shrestha

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