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Genome annotation

Harmonizing and integrating the NCI Genomic Data Commons through accessible, interactive, and cloud-enabled workflows

Ling-Hong Hung, Bryce Fukuda, [ ... ], Ka Yee Yeung

Assembly of the salt-secreting mangrove Avicennia rumphiana

Jeremy R. Shearman, Chaiwat Naktang, [ ... ], Sithichoke Tangphatsornruang

An insight into the genome-wide analysis of bacterial defense mechanisms in a uropathogenic Morganella morganii isolate from Bangladesh

Syed Muktadir Al Sium, Barna Goswami, [ ... ], Md. Salim Khan

SCRMshaw: Supervised cis-regulatory module prediction for insect genomes

Hasiba Asma, Luna Liu, Marc S. Halfon

Metagenome-assembled genomes provide insight into the microbial taxonomy and ecology of the Buhera soda pans, Zimbabwe

Ngonidzashe Mangoma, Nerve Zhou, Thembekile Ncube

Chromosomal gene order defines several structural classes of Staphylococcus epidermidis genomes

Naya Nagy, Paul Hodor

Differential induction of defense genes in hexaploid wheat roots by the plant-parasitic nematodes Pratylenchus neglectus and P. thornei

Patricia A. Okubara, Richard M. Sharpe, [ ... ], Inga A. Zasada

Taking advantage of reference-guided assembly in a slowly-evolving lineage: Application to Testudo graeca

Andrea Mira-Jover, Eva Graciá, [ ... ], Yann Bourgeois

Phased chromosome-scale genome assembly of an asexual, allopolyploid root-knot nematode reveals complex subgenomic structure

Michael R. Winter, Adam P. Taranto, [ ... ], David H. Lunt

Functional classes of SNPs related to psychiatric disorders and behavioral traits contrast with those related to neurological disorders

Mark A. Reimers, Kenneth S. Kendler

Annotation of nuclear lncRNAs based on chromatin interactions

Saumya Agrawal, Andrey Buyan, [ ... ], Michiel J. L. de Hoon

Characterization of microsatellite markers in the coding regions of the Penaeus vannamei genome

Iasmim Santos Mangabeira-Silva, Paulo Eduardo Toscano Soares, [ ... ], Daniel Carlos Ferreira Lanza

Identification of differentially expressed mRNA/lncRNA modules in acutely regorafenib-treated sorafenib-resistant Huh7 hepatocellular carcinoma cells

Mina Baek, Minjae Kim, [ ... ], Young Gyu Chai

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