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DNA libraries

A gene-specific RNA enrichment protocol for nanopore direct-RNA sequencing

Maja Bele Dyrendalsli, Cecilie Løkke, Christer Einvik

published 11 Feb 2026

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Megabarcoding dark taxa – Assessing the utility of mass DNA barcoding for phorid fly species discovery

Jiri Vihavainen, Niina Kiljunen, Pekka Pohjola, Jaclyn McKeown, Eveliina Oinonen, Marko Mutanen, Jaakko Pohjoismäki

published 02 Dec 2025

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cONcat: Computational reconstruction of concatenated fragments from long Oxford Nanopore reads

Alexander J. Petri, Mai Thi-Huyen Nguyen, Anjali Rajwar, Erik Benson, Kristoffer Sahlin

published 24 Jul 2025

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Telomere length as a biomarker for fetal fraction prediction in non-invasive prenatal testing

Zuzana Holesova, Jaroslav Budis, Marcel Kucharik, Juraj Gazdarica, Daria Carska, Gabriel Minarik, Michaela Hyblova, Tomas Szemes

published 11 Jul 2025

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Adaptation of PCR-based library preparation for MGI platform for cancer mutation testing in clinical setting

P.A. Shatalov, M.P. Raygorodskaya, A.P. Shinkarkina, A.A. Traspov, A.V. Murzaeva, Y.A. Doroshenko, I.A. Leuhina, V.A. Mileyko, M. V. Ivanov, T.V. Grigoreva, A. A. Lebedeva, E.M. Veselovsky, L.D. Belyaeva, E. V. Belova, A.D. Kaprin, P.V. Shegai

published 04 Jun 2025

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Host-pathogen protein interaction studies: quality control of cDNA libraries using nanopore sequencing

Cécile Schimmich, Mathilde Gondard, Gregory Caignard, José-Carlos Valle-Casuso, Damien Vitour, François Piumi

published 30 May 2025

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Evaluation of metatranscriptomic sequencing protocols to obtain full-length RNA virus genomes from mammalian tissues

Yiqiao Li, Mariana Polychronopoulou, Ine Boonen, Antonios Fikatas, Sophie Gryseels, Anne Laudisoit, Joelle Gouy de Bellocq, Bram Vrancken, Gkikas Magiorkinis, Philippe Lemey, Magda Bletsa

published 30 May 2025

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Proliferative arrest induces neuronal differentiation and innate immune responses in normal and Creutzfeldt-Jakob Disease agent (CJ) infected rat septal neurons

Nathan Pagano, Gerard Aguilar Perez, Rolando Garcia-Milian, Laura Manuelidis

published 28 May 2025

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High-performance protocol for ultra-short DNA sequencing using Oxford Nanopore Technology (ONT)

Lukas Žemaitis, Rūta Palepšienė, Simonas Juzėnas, Gediminas Alzbutas, Pierre-Yves Burgi, Thomas Heinis, Jérôme Charmet, Silvia Angeloni Suter, Martin Jost, Renaldas Raišutis, Friedrich Simmel, Ignas Galminas

published 29 Apr 2025

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Reliable RNA-seq analysis from FFPE specimens as a means to accelerate cancer-related health disparities research

Mitchell J. Frederick, Dannelys Perez-Bello, Pedram Yadollahi, Patricia Castro, Alan Frederick, Andrew Frederick, Rashid A. Osman, Fonma Essien, Imelda Yebra, Ashley Hamlin, Thomas J. Ow, Heath D. Skinner, Vlad C. Sandulache

published 21 Apr 2025

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Construction of cDNA library of Dalbergia odorifera induced by low temperature stress and screening of low temperature tolerant genes

Shaocui Li, Xia An, Fayong Li, Yining Chen, Xiaowen Li

published 01 Apr 2025

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A method for PCR-free library preparation for sequencing palaeogenomes

Kirstin Henneberger, Axel Barlow, Federica Alberti, Michaela Preick, Silviu Constantin, Doris Döppes, Wilfried Rosendahl, Michael Hofreiter, Johanna L. A. Paijmans

published 19 Mar 2025

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Error-corrected ultradeep next-generation sequencing for detection of clonal haematopoiesis and haematological neoplasms – sensitivity, specificity and accuracy

Melinda L. Tursky, Crisbel M. Artuz, Melissa Rapadas, Gary A. Wittert, Timothy J. Molloy, David D. Ma

published 26 Feb 2025

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