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Database and informatics methods

Hormone-Mediated Gene Regulation and Bioinformatics: Learning One from the Other

João Carlos Sousa, Manuel João Costa, Joana Almeida Palha

A Novel Motif Identified in Dependence Receptors

Gabriel del Rio, Darci J. Kane, Keith D. Ball, Dale E. Bredesen

MamuSNP: A Resource for Rhesus Macaque (Macaca mulatta) Genomics

Ripan S. Malhi, Brad Sickler, [ ... ], David Glenn Smith

Transcriptome of Pneumocystis carinii during Fulminate Infection: Carbohydrate Metabolism and the Concept of a Compatible Parasite

Melanie T. Cushion, A. George Smulian, [ ... ], Jarek Meller

Efficient Identification of Critical Residues Based Only on Protein Structure by Network Analysis

Michael P. Cusack, Boris Thibert, Dale E. Bredesen, Gabriel del Rio

Searching for Tissue-Specific Expression Pattern-Linked Nucleotides of UGT1A Isoforms

Wei Zhang, Wanqing Liu, Federico Innocenti, Mark J. Ratain

Assessing Performance of Orthology Detection Strategies Applied to Eukaryotic Genomes

Feng Chen, Aaron J. Mackey, Jeroen K. Vermunt, David S. Roos

Model Structure of Human APOBEC3G

Kun-Lin Zhang, Bastien Mangeat, [ ... ], Olivier Michielin

Modular Mass Spectrometric Tool for Analysis of Composition and Phosphorylation of Protein Complexes

Justin D. Blethrow, Chao Tang, Changhui Deng, Andrew N. Krutchinsky

Extensive Polycistronism and Antisense Transcription in the Mammalian Hox Clusters

Gaëll Mainguy, Jan Koster, [ ... ], Antony Durston

Large-Scale Comparative Genomic Ranking of Taxonomically Restricted Genes (TRGs) in Bacterial and Archaeal Genomes

Gareth A. Wilson, Edward J. Feil, Andrew K. Lilley, Dawn Field

Global Identification and Characterization of Transcriptionally Active Regions in the Rice Genome

Lei Li, Xiangfeng Wang, [ ... ], Xing Wang Deng

Tetrahymena Metallothioneins Fall into Two Discrete Subfamilies

Silvia Díaz, Francisco Amaro, [ ... ], Juan C. Gutiérrez

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