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Cancer genomics

Benchmark of biomarker identification and prognostic modeling methods on diverse censored data

Wesley Fletcher, Samiran Sinha

A fusion-deletion genomic-event underlies poor prognosis in young patients with luminal breast cancer

Le-Wei Zheng, Yi-Ming Liu, Ke-Da Yu, Cui-Cui Liu

Tumor hypoxia is associated with global copy-number alteration burden and subtype-dependent overall survival in breast cancer: Evidence from TCGA and METABRIC

Wenhan Yang

HCLmNet: A unified hybrid continual learning strategy multimodal network for lung cancer survival prediction

MD Ilias Bappi, David J. Richter, Shivani Sanjay Kolekar, Kyungbaek Kim

A multiple filter-wrapper feature selection algorithm based on process optimization mechanism for high-dimensional omics data analysis

Yongtao Shi, Yuefeng Zheng, Xiaotong Bai

Biologically-informed regional subset analysis with CatBoost for robust tissue-of-origin prediction

Sungmin Yang, Hong-Gee Kim

Analytical validation of a homologous recombination deficiency signature (HRDsig) in pan-tumor tissue samples

Wenshu Li, Jeffrey A. Leibowitz, [ ... ], Brennan Decker

In vivo investigation of STN1 downregulation in melanoma formation in adult mice following UV irradiation

Sara Knowles, Fang Wang, [ ... ], Weihang Chai

Personal approach for cancer treatment: A meta-analysis of Phase II clinical trials

Mikhail B. Potievskiy, Elena P. Zharova, [ ... ], Peter V. Shegai

Evaluation of therapeutic agent selection based on comprehensive genomic profiling in gastroenteropancreatic neuroendocrine neoplasms

Suguru Miyazawa, Hiroaki Ono, [ ... ], Minoru Tanabe

Epigenome and three-dimensional genome architecture remodeling during NDM29-mediated retro-transformation of neuroblastoma cells

Francesca Baldini, Aldo Pagano, [ ... ], Laura Vergani

Dissecting cell-free DNA fragmentation variation in tumors using cell line-derived xenograft mouse

Ruiqing Fu, He Amy Su, [ ... ], Daru Lu

Characterization and identification of extrachromosomal circular DNA in cholangiocarcinoma

Zar Zar Win, Hasaya Dokduang, [ ... ], Arporn Wangwiwatsin

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