BEAST 2.5: An advanced software platform for Bayesian evolutionary analysis

• Remco Bouckaert ,

  Roles Formal analysis, Investigation, Methodology, Project administration, Software, Validation, Visualization, Writing – original draft, Writing – review & editing

  * E-mail: r.bouckaert@auckland.ac.nz (RB); alexei@cs.auckland.ac.nz (AJD)

  Affiliations Centre of Computational Evolution, University of Auckland, Auckland, New Zealand, Max Planck Institute for the Science of Human History, Jena, Germany

  http://orcid.org/0000-0001-6765-3813

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• Timothy G. Vaughan,

  Roles Software, Writing – original draft, Writing – review & editing

  Affiliations ETH Zürich, Department of Biosystems Science and Engineering, 4058 Basel, Switzerland, Swiss Institute of Bioinformatics, Lausanne, Switzerland

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• Joëlle Barido-Sottani,

  Roles Software

  Affiliations ETH Zürich, Department of Biosystems Science and Engineering, 4058 Basel, Switzerland, Swiss Institute of Bioinformatics, Lausanne, Switzerland

  http://orcid.org/0000-0002-5220-5468

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• Sebastián Duchêne,

  Roles Software

  Affiliation Department of Biochemistry and Molecular Biology, University of Melbourne, Melbourne, Victoria, Australia

  http://orcid.org/0000-0002-2863-0907

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• Mathieu Fourment,

  Roles Software

  Affiliation ithree institute, University of Technology Sydney, Sydney, Australia

  http://orcid.org/0000-0001-8153-9822

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• Alexandra Gavryushkina,

  Roles Investigation, Software, Validation, Writing – review & editing

  Affiliation Department of Biochemistry, University of Otago, Dunedin 9016, New Zealand

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• Joseph Heled,

  Roles Software

  Affiliation Independent researcher, Auckland, New Zealand

  http://orcid.org/0000-0002-2403-7997

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• Graham Jones,

  Roles Software, Writing – review & editing

  Affiliation Department of Biological and Environmental Sciences, University of Gothenburg, Box 461, SE 405 30 Göteborg, Sweden

  http://orcid.org/0000-0002-9686-5871

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• Denise Kühnert,

  Roles Software

  Affiliation Max Planck Institute for the Science of Human History, Jena, Germany

  http://orcid.org/0000-0002-5657-018X

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• Nicola De Maio,

  Roles Software, Writing – original draft, Writing – review & editing

  Affiliation European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Cambridgeshire, UK

  http://orcid.org/0000-0002-1776-8564

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• Michael Matschiner,

  Roles Data curation, Software, Visualization, Writing – review & editing

  Affiliation Department of Environmental Sciences, University of Basel, 4051 Basel, Switzerland

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• Fábio K. Mendes,

  Roles Software, Writing – review & editing

  Affiliation Centre of Computational Evolution, University of Auckland, Auckland, New Zealand

  http://orcid.org/0000-0001-6204-7208

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• Nicola F. Müller,

  Roles Formal analysis, Software, Visualization, Writing – original draft

  Affiliations ETH Zürich, Department of Biosystems Science and Engineering, 4058 Basel, Switzerland, Swiss Institute of Bioinformatics, Lausanne, Switzerland

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• Huw A. Ogilvie,

  Roles Software, Writing – original draft, Writing – review & editing

  Affiliation Department of Computer Science, Rice University, Houston, TX 77005-1892, USA

  http://orcid.org/0000-0003-1589-6885

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• Louis du Plessis,

  Roles Formal analysis, Software, Visualization, Writing – review & editing

  Affiliation Department of Zoology, University of Oxford, Oxford, OX1 3PS, UK

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• Alex Popinga,

  Roles Software

  Affiliation Centre of Computational Evolution, University of Auckland, Auckland, New Zealand

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• Andrew Rambaut,

  Roles Conceptualization

  Affiliation Institute of Evolutionary Biology, University of Edinburgh, Ashworth Laboratories, Edinburgh, EH9 3FL UK

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• David Rasmussen,

  Roles Software

  Affiliation Department of Entomology and Plant Pathology, North Carolina State University, Raleigh, NC 27695, USA

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• Igor Siveroni,

  Roles Software

  Affiliation Department of Infectious Disease Epidemiology, Imperial College London, Norfolk Place, W2 1PG, UK

  http://orcid.org/0000-0003-2595-3062

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• Marc A. Suchard,

  Roles Conceptualization

  Affiliation Department of Biomathematics, David Geffen School of Medicine, University of California, Los Angeles, CA, USA

  http://orcid.org/0000-0001-9818-479X

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• Chieh-Hsi Wu,

  Roles Software

  Affiliation Department of Statistics, University of Oxford, OX1 3LB, UK

  ⨯
• Dong Xie,

  Roles Software

  Affiliation Centre of Computational Evolution, University of Auckland, Auckland, New Zealand

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• Chi Zhang,

  Roles Software, Visualization, Writing – review & editing

  Affiliation Institute of Vertebrate Paleontology and Paleoanthropology, Chinese Academy of Sciences, Beijing, China

  http://orcid.org/0000-0001-6009-5273

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• Tanja Stadler,

  Roles Conceptualization, Methodology, Supervision, Writing – original draft, Writing – review & editing

  Affiliations ETH Zürich, Department of Biosystems Science and Engineering, 4058 Basel, Switzerland, Swiss Institute of Bioinformatics, Lausanne, Switzerland

  http://orcid.org/0000-0001-6431-535X

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•  [ ... ],
• Alexei J. Drummond

  Roles Conceptualization, Funding acquisition, Methodology, Project administration, Resources, Software, Supervision, Visualization, Writing – original draft, Writing – review & editing

  * E-mail: r.bouckaert@auckland.ac.nz (RB); alexei@cs.auckland.ac.nz (AJD)

  Affiliation Centre of Computational Evolution, University of Auckland, Auckland, New Zealand

  http://orcid.org/0000-0003-4454-2576

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