Murine and related chapparvoviruses are nephro-tropic and produce novel accessory proteins in infected kidneys
Fig 5
Clustering of MKPV/MuCPV sub-strains based on single nucleotide variations (SNV) in a 267 bp region in NS1 (see blue box in Fig 1A).
Data are insufficient to construct a phylogeny. The provenance of each sequence is indicated by text at left and by flags at right, with red text indicating accessions, from top to bottom, MH670587, MH670588, MF175078 and MG679365; for IDEXX BioAnalytics pathology samples, donor institutions are identified by an anonymizing code unique to each institution and by a geographical region where known–each in brackets. Shading over the text indicates infection of a genetically immune-competent strain (blue = laboratory mouse, orange = wild-caught mouse). The coloured bar at the top indicates the consensus sequence (yellow = A, green = G, blue = C, red = T). SNVs varying from the consensus are presented as in Fig 1A, with colour-coding to indicate the non-consensus base. Amino acid changes (five in total) are indicated by “XnnnX”.