Multi-omics characterization of the necrotrophic mycoparasite Saccharomycopsis schoenii
Fig 4
S. schoenii gene and GO term categories upregulated during gradual nutrient availability and/or predation conditions.
A) Fold upregulation of S. schoenii genes during gradual nutrient availability, compared to S. schoenii on standard media (YPD), without (right) or with (left) S. cerevisiae present as prey. Upregulated genes were manually curated into three categories; mainly upregulated during conditions of Nutrient limitation (CSM, grey), of Methionine deprivation (CSM-Met, blue) or Predation (CSM + S.c., CSM-Met + S.c. or SD + S.c.). Down pointing arrows symbolize genes with two (one arrow) or five (two arrows) fold lower fold increase values when prey was present, compared to when no prey was present, on CSM-Met. B) Top 15 GO term categories of genes upregulated during Nutrient limitation, Methionine deprivation of Predation conditions. Genes are analyzed in FungiFun2 by their gene name. #Genes/category defines how many genes can theoretically be found in each GO ID, whereas #genes/input defines how many of the submitted genes per total submitted genes belong to each GO ID.