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Deciphering the Cryptic Genome: Genome-wide Analyses of the Rice Pathogen Fusarium fujikuroi Reveal Complex Regulation of Secondary Metabolism and Novel Metabolites

Figure 2

Whole genome comparison of F. fujikuroi withF. verticillioides.

Dotplot of F. fujikuroi chromosomes and scaffolds against F. verticillioides calculated using MUMer [121] highlights overall collinearity. Orthologous DNA is represented by red dots, inverted segments are shown as blue dots. Inset magnifies F. fujikuroi chromosome XII, which has no homologue in the F. verticillioides scaffold set. The missing subtelomeric regions of chromosome IV in F. fujikuroi are highlighted by vertical purple lines. Dots that are located above or below the line indicating collinearity represent largely repetitive DNA.

Figure 2

doi: https://doi.org/10.1371/journal.ppat.1003475.g002