Phylogeny and Origins of Hantaviruses Harbored by Bats, Insectivores, and Rodents
Figure 2
Phylogenetic trees based on the entire coding regions of hantavirus genomes including those obtained here inferred using the BEAST (MCC), Bayesian, and ML methods.
The ML/MCC/Bayesian trees were based on the coding sequences of the S (A) and M (B) segments. Numbers (>70%/>0.7/>0.7) above or below branches indicate posterior node probabilities or bootstrap values. Phylogenetic tree (C) was inferred using the ML method based on the partial L segment sequences. The MCC tree – shown here in all cases – was automatically rooted on the assumption of a molecular clock. The basal lineage estimated by the MCC tree was then used as an outgroup in the Bayesian and ML analyses. Scale bar represents number of nucleotide substitutions per site.