Genetically distinct within-host subpopulations of hepatitis C virus persist after Direct-Acting Antiviral treatment failure

• Lele Zhao ,

  Roles Conceptualization, Formal analysis, Methodology, Visualization, Writing – original draft, Writing – review & editing

  * E-mail: lele.zhao@bdi.ox.ac.uk (LZ); katrina.lythgoe@biology.ox.ac.uk (KL)

  Affiliations Nuffield Department of Medicine, Pandemic Sciences Institute, University of Oxford, Oxford, United Kingdom, Big Data Institute, Li Ka Shing Centre for Health Information and Discovery, University of Oxford, Oxford, United Kingdom

  https://orcid.org/0000-0002-2807-1914

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• Matthew Hall,

  Roles Formal analysis, Writing – review & editing

  Affiliations Nuffield Department of Medicine, Pandemic Sciences Institute, University of Oxford, Oxford, United Kingdom, Big Data Institute, Li Ka Shing Centre for Health Information and Discovery, University of Oxford, Oxford, United Kingdom

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• Prahalad Giridhar,

  Roles Formal analysis

  Affiliation Department of Biology, University of Oxford, Oxford, United Kingdom

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• Mahan Ghafari,

  Roles Formal analysis, Writing – review & editing

  Affiliation Nuffield Department of Medicine, Pandemic Sciences Institute, University of Oxford, Oxford, United Kingdom

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• Steven Kemp,

  Roles Software

  Affiliation Nuffield Department of Medicine, Pandemic Sciences Institute, University of Oxford, Oxford, United Kingdom

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• Haiting Chai,

  Roles Data curation

  Affiliation Nuffield Department of Medicine, Peter Medawar Building for Pathogen Research, University of Oxford, Oxford, United Kingdom

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• Paul Klenerman,

  Roles Supervision

  Affiliation Nuffield Department of Medicine, Peter Medawar Building for Pathogen Research, University of Oxford, Oxford, United Kingdom

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• Eleanor Barnes,

  Roles Supervision

  Affiliation Nuffield Department of Medicine, Peter Medawar Building for Pathogen Research, University of Oxford, Oxford, United Kingdom

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• M. Azim Ansari,

  Roles Data curation, Formal analysis, Supervision

  Affiliation Nuffield Department of Medicine, Peter Medawar Building for Pathogen Research, University of Oxford, Oxford, United Kingdom

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• Katrina Lythgoe

  Roles Conceptualization, Funding acquisition, Supervision, Writing – original draft, Writing – review & editing

  * E-mail: lele.zhao@bdi.ox.ac.uk (LZ); katrina.lythgoe@biology.ox.ac.uk (KL)

  Affiliations Nuffield Department of Medicine, Pandemic Sciences Institute, University of Oxford, Oxford, United Kingdom, Big Data Institute, Li Ka Shing Centre for Health Information and Discovery, University of Oxford, Oxford, United Kingdom, Department of Biology, University of Oxford, Oxford, United Kingdom

  https://orcid.org/0000-0002-7089-7680

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